RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CFAP36Q96G28 342 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 RPRD1AQ96P16 312 aaPredicted RBP10.4□□□□□ -0.74
MSH5-213ENST00000468136 GCNAQ96QF7 691 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 WDR83Q9BRX9 315 aaKnown RBP10.4□□□□□ -0.74
MSH5-213ENST00000468136 SP110Q9HB58 689 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 KCNK9Q9NPC2 374 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 RBM22Q9NW64 420 aaKnown RBP eCLIP10.4□□□□□ -0.74
MSH5-213ENST00000468136 HCSTQ9UBK5 93 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 DPP7Q9UHL4 492 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 MAGED2Q9UNF1 606 aaPredicted RBP10.4□□□□□ -0.74
MSH5-213ENST00000468136 TTLL3Q9Y4R7 772 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 INSL5Q9Y5Q6 135 aa10.4□□□□□ -0.74
MSH5-213ENST00000468136 ATXN2Q99700 1313 aaKnown RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 GREB1Q4ZG55 1949 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ILVBLA1L0T0 632 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 C2CD2LO14523 706 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ADAM12O43184 909 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 LPXNO60711 386 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 SEC24AO95486 1093 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 EPOP01588 193 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 RB1P06400 928 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 PAMP19021 973 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 NFKB1P19838 968 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 DDX6P26196 483 aaKnown RBP eCLIP10.39□□□□□ -0.75
MSH5-213ENST00000468136 OR1E1P30953 314 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 CD68P34810 354 aaPredicted RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 POLD2P49005 469 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 PAPOLAP51003 745 aaKnown RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 NRLP54845 237 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 GAD2Q05329 585 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 SLC18A2Q05940 514 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ZBTB17Q13105 803 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 POLD3Q15054 466 aaPredicted RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 KCTD19Q17RG1 926 aaPredicted RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 PCID2Q5JVF3 399 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ARTNQ5T4W7 220 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 STXBP5Q5T5C0 1151 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ADGRF1Q5T601 910 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 GKAP1Q5VSY0 366 aaPredicted RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 CASC4Q6P4E1 433 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 NLRP9Q7RTR0 991 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 UBE2Q1Q7Z7E8 422 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 C14orf80Q86SX3 495 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 TMEM135Q86UB9 458 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 IGDCC3Q8IVU1 814 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 TRIM42Q8IWZ5 723 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 TAB3Q8N5C8 712 aaPredicted RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 ANKS4BQ8N8V4 417 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ZNF557Q8N988 423 aaPredicted RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 CKAP2Q8WWK9 683 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 HERVK_113Q902F9 699 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 MRPS31Q92665 395 aaKnown RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 PEX13Q92968 403 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 CELF6Q96J87 481 aaKnown RBP10.39□□□□□ -0.75
MSH5-213ENST00000468136 CABS1Q96KC9 395 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 MAGEB18Q96M61 343 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 SAMD11Q96NU1 681 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 AGAP3Q96P47 875 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 CCT8L2Q96SF2 557 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ZBED2Q9BTP6 218 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ARNT2Q9HBZ2 717 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 TXNDC16Q9P2K2 825 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 TBK1Q9UHD2 729 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 NUDT5Q9UKK9 219 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 SOX13Q9UN79 622 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 SNX10Q9Y5X0 201 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 FAM169AQ9Y6X4 670 aa10.39□□□□□ -0.75
MSH5-213ENST00000468136 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 A0A1B0GVM2 712 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 TCAF2A6NFQ2 919 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 ZBBXA8MT70 800 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 TEX28O15482 410 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 COCHO43405 550 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 AVILO75366 819 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 SOAT2O75908 522 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 OLFM2O95897 454 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 TBX18O95935 607 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 LRG1P02750 347 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 POU2F2P09086 479 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 RPL17P18621 184 aaKnown RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 DNAJB1P25685 340 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 LBX1P52954 281 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 TWF1Q12792 350 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 SERINC3Q13530 473 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 CRYMQ14894 314 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 UGP2Q16851 508 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 RALGPS1Q5JS13 557 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 HP1BP3Q5SSJ5 553 aaPredicted RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 UBAP2Q5T6F2 1119 aaKnown RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 GRTP1Q5TC63 336 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 RAP1GAP2Q684P5 730 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 CPLX4Q7Z7G2 160 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
MSH5-213ENST00000468136 LCA5Q86VQ0 697 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 CTAGE3PQ8IX95 158 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 LMNTD2Q8IXW0 634 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 CYP4X1Q8N118 509 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 CNTD1Q8N815 330 aa10.38□□□□□ -0.75
MSH5-213ENST00000468136 PPM1NQ8N819 430 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms