RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CASS4Q9NQ75 786 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 UBP1Q9NZI7 540 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 IGLV3-10A0A075B6K4 115 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 MATN3O15232 486 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 CACNG3O60359 315 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 PGAM1P18669 254 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 SLC18A2Q05940 514 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 FBXL22Q6P050 247 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 CYS1Q717R9 158 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 CCDC63Q8NA47 563 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF75CPQ92670 426 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 IGSF8Q969P0 613 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 THOC1Q96FV9 657 aaKnown RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF558Q96NG5 402 aa18.64■□□□□ 0.57
COL9A3-205ENST00000466192 GEMIN8Q9NWZ8 242 aaKnown RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 PPARGC1AQ9UBK2 798 aaKnown RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 AFF4Q9UHB7 1163 aaKnown RBP18.64■□□□□ 0.57
COL9A3-205ENST00000466192 ABLIM3O94929 683 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 FSBPO95073 299 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 TIMP1P01033 207 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 RHOQP17081 205 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 DSG1Q02413 1049 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 RING1Q06587 406 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 ACTN3Q08043 901 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-205ENST00000466192 CRYMQ14894 314 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 SMAD1Q15797 465 aaKnown RBP18.63■□□□□ 0.57
COL9A3-205ENST00000466192 MROH9Q5TGP6 573 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 FBXO46Q6PJ61 603 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-205ENST00000466192 CCNJLQ8IV13 435 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 UMODL1-AS1Q8N2C9 162 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 ANKLE1Q8NAG6 615 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF461Q8TAF7 563 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 ARMC5Q96C12 935 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 TMEM169Q96HH4 297 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 APOL2Q9BQE5 337 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 ALG13Q9NP73 1137 aaKnown RBP18.63■□□□□ 0.57
COL9A3-205ENST00000466192 TMEM248Q9NWD8 314 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 SLC17A6Q9P2U8 582 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 ARL2BPQ9Y2Y0 163 aa18.63■□□□□ 0.57
COL9A3-205ENST00000466192 KRT38O76015 456 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 NEK3P51956 506 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 WDR5P61964 334 aaKnown RBP18.62■□□□□ 0.57
COL9A3-205ENST00000466192 BTG3Q14201 252 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-205ENST00000466192 CES3Q6UWW8 571 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 KLHDC8BQ8IXV7 354 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 GRAMD1AQ96CP6 724 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 CEP295NLQ96MC4 621 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 FAM111AQ96PZ2 611 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 NAT9Q9BTE0 207 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 FNIP2Q9P278 1114 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 PRKAG3Q9UGI9 489 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 MYLKQ15746 1914 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 MIA3Q5JRA6 1907 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 HMGA1P17096 107 aaKnown RBP18.62■□□□□ 0.57
COL9A3-205ENST00000466192 KCNQ1P51787 676 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 LACTB2Q53H82 288 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-205ENST00000466192 NADSYN1Q6IA69 706 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 DNAAF3Q8N9W5 541 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 SPATA22Q8NHS9 363 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 TTC17Q96AE7 1141 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 IL1RAPL1Q9NZN1 696 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 IPO11Q9UI26 975 aaKnown RBP18.62■□□□□ 0.57
COL9A3-205ENST00000466192 STARD13Q9Y3M8 1113 aa18.62■□□□□ 0.57
COL9A3-205ENST00000466192 HMX2A2RU54 273 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 H0YHG0 523 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 COPEO14579 308 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 RFPL1O75677 317 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 ACRP10323 421 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 SCTRP47872 440 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 NDST2P52849 883 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 PRPSAP1Q14558 356 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 TIGD7Q6NT04 549 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 CDHR3Q6ZTQ4 885 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF276Q8N554 614 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 MYEOVQ96EZ4 313 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 RMDN2Q96LZ7 410 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF512Q96ME7 567 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 SRPK1Q96SB4 655 aaKnown RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 IQCGQ9H095 443 aaKnown RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 LRRC40Q9H9A6 602 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 ACTR5Q9H9F9 607 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 GLOD4Q9HC38 313 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 KLHL14Q9P2G3 628 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 ZNF212Q9UDV6 495 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 CHD5Q8TDI0 1954 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 DRGXA6NNA5 263 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 EDF1O60869 148 aaKnown RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 HLA-DQB2P05538 268 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 ETV4P43268 484 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 NIPAL4Q0D2K0 466 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 FAM133BQ5BKY9 247 aaKnown RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 CERCAMQ5T4B2 595 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 LRRC49Q8IUZ0 686 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 HMCESQ96FZ2 354 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 FCRL3Q96P31 734 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-205ENST00000466192 FCRL5Q96RD9 977 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 HERC2P3Q9BVR0 1158 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 SLC13A1Q9BZW2 595 aa18.61■□□□□ 0.57
COL9A3-205ENST00000466192 VPS11Q9H270 941 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms