RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ACCSLQ4AC99 568 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 ATP13A4Q4VNC1 1196 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 RETSATQ6NUM9 610 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 POLNQ7Z5Q5 900 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 UMODL1-AS1Q8N2C9 162 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 SH2D3CQ8N5H7 860 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 ATP11CQ8NB49 1132 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 OR2T3Q8NH03 318 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 GAB3Q8WWW8 586 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 PHOX2BQ99453 314 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 MKRN2Q9H000 416 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 SLC6A17Q9H1V8 727 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 NOL6Q9H6R4 1146 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 FBRSQ9HAH7 460 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 PRDM16Q9HAZ2 1276 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 HS3ST2Q9Y278 367 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 EML5Q05BV3 1969 aa14.85□□□□□ -0.03
SQSTM1-205ENST00000464493 NUP205Q92621 2012 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 RASA4BC9J798 803 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 PROB1E7EW31 1015 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 RASA4O43374 803 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 SIN3BO75182 1162 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 ZMPSTE24O75844 475 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 SRCP12931 536 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 GJC1P36383 396 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 MRE11P49959 708 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 VAV2P52735 878 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 BYSLQ13895 437 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 DPYSQ14117 519 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 SIM2Q14190 667 aaPredicted RBP14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 DLG2Q15700 870 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 PARP15Q460N3 678 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 C9orf64Q5T6V5 341 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 KIAA1324Q6UXG2 1013 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 LINGO4Q6UY18 593 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 KIAA1328Q86T90 577 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 ZNF354CQ86Y25 554 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 KCTD6Q8NC69 237 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 CCDC112Q8NEF3 446 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 FAM71BQ8TC56 605 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 FRS2Q8WU20 508 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 PRCCQ92733 491 aaPredicted RBP14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 PTPRN2Q92932 1015 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 SIPA1Q96FS4 1042 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 CALR3Q96L12 384 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 CSPG4P5Q96PW8 444 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 PCDH18Q9HCL0 1135 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 INVSQ9Y283 1065 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 DUSP10Q9Y6W6 482 aa14.84□□□□□ -0.03
SQSTM1-205ENST00000464493 CXorf51AA0A1B0GTR3 108 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 BTNL10A8MVZ5 291 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 PJA2O43164 708 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 KDELR3O43731 214 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 BUB1BO60566 1050 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 ZNF217O75362 1048 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 COMTP21964 271 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 AMPD1P23109 780 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 IL4RP24394 825 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 ARSEP51690 589 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 CLCN6P51797 869 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 NDST2P52849 883 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 NAP1L1P55209 391 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 ARF5P84085 180 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 PDK2Q15119 407 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 ZFYVE27Q5T4F4 411 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 CEP68Q76N32 757 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 METTL3Q86U44 580 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 MAP7D3Q8IWC1 876 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 LRRC8AQ8IWT6 810 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 TXLNBQ8N3L3 684 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 RLN3Q8WXF3 142 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 TSC1Q92574 1164 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 NKD2Q969F2 451 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 FAM122AQ96E09 287 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 HMCESQ96FZ2 354 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 CELF6Q96J87 481 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 DESI2Q9BSY9 194 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 LACRTQ9GZZ8 138 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 RSPH9Q9H1X1 276 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 EPC1Q9H2F5 836 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 LRRC19Q9H756 370 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 RCOR3Q9P2K3 495 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 SALL4Q9UJQ4 1053 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 HYOU1Q9Y4L1 999 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 ALG6Q9Y672 507 aa14.83□□□□□ -0.04
SQSTM1-205ENST00000464493 K7ERQ8 282 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 DCLK1O15075 740 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 SMAD6O43541 496 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 BUB1O43683 1085 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 SPOPO43791 374 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 RNASEH1O60930 286 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 LMNAP02545 664 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 CD48P09326 243 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 C7P10643 843 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 ACADMP11310 421 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 VAV1P15498 845 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 P2RY2P41231 377 aa14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 SERPINH1P50454 418 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 GEMIN4P57678 1058 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-205ENST00000464493 RPS14P62263 151 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms