RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZNF347Q96SE7 839 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 TRIM31Q9BZY9 425 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 OSBPL5Q9H0X9 879 aaPredicted RBP4.51□□□□□ -1.69
CLK1-208ENST00000464454 TAOK3Q9H2K8 898 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 SLC22A11Q9NSA0 550 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 ELOVL5Q9NYP7 299 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 CNOT7Q9UIV1 285 aaKnown RBP4.51□□□□□ -1.69
CLK1-208ENST00000464454 SLC25A13Q9UJS0 675 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 AGO2Q9UKV8 859 aaKnown RBP4.51□□□□□ -1.69
CLK1-208ENST00000464454 TBX20Q9UMR3 447 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 TNFSF13BQ9Y275 285 aa4.51□□□□□ -1.69
CLK1-208ENST00000464454 CCNT1O60563 726 aaKnown RBP4.5□□□□□ -1.69
CLK1-208ENST00000464454 UGDHO60701 494 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 NFATC1O95644 943 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 HNRNPA1P09651 372 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK1-208ENST00000464454 CYP4B1P13584 511 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 PKMP14618 531 aaKnown RBP4.5□□□□□ -1.69
CLK1-208ENST00000464454 TNFAIP3P21580 790 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 PRKCHP24723 683 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 LMO1P25800 156 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 GSTM2P28161 218 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 AVPR2P30518 371 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 MPP1Q00013 466 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 TWIST1Q15672 202 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 MAPRE1Q15691 268 aaKnown RBP4.5□□□□□ -1.69
CLK1-208ENST00000464454 MTFR2Q6P444 385 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 MAATS1Q7Z4T9 603 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 TMEM200AQ86VY9 491 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK1-208ENST00000464454 TCP11L2Q8N4U5 519 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 PCYOX1LQ8NBM8 494 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 ST8SIA4Q92187 359 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 SKA1Q96BD8 255 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 RRP36Q96EU6 259 aaKnown RBP4.5□□□□□ -1.69
CLK1-208ENST00000464454 PIMREGQ9BSJ6 248 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 HDHD5Q9BXW7 423 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 SPRTNQ9H040 489 aaPredicted RBP4.5□□□□□ -1.69
CLK1-208ENST00000464454 STN1Q9H668 368 aaKnown RBP4.5□□□□□ -1.69
CLK1-208ENST00000464454 PREBQ9HCU5 417 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 TXNRD2Q9NNW7 524 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK1-208ENST00000464454 CD207Q9UJ71 328 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 HS3ST3B1Q9Y662 390 aa4.5□□□□□ -1.69
CLK1-208ENST00000464454 ZNF521Q96K83 1311 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 KIR2DS5A0A0G2JLQ3 304 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 SH2D7A6NKC9 451 aaPredicted RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 HMGB1P1B2RPK0 211 aaPredicted RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 KIR2DS3K7RE56 304 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 SYN3O14994 580 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 TLX3O43711 291 aaPredicted RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 TULP3O75386 442 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 MBD4O95243 580 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 LCKP06239 509 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 CYP19A1P11511 503 aaPredicted RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 LYL1P12980 280 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 ARSAP15289 507 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 GPD2P43304 727 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 ME1P48163 572 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 MVDP53602 400 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 NR1H2P55055 460 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 ARHGAP8P85298 464 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 MTX1Q13505 466 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 GALNT3Q14435 633 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 PGM5Q15124 567 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 GPR68Q15743 365 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 BAK1Q16611 211 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 NFIL3Q16649 462 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 KIAA1755Q5JYT7 1200 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 TTC39AQ5SRH9 613 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 RSRC2Q7L4I2 434 aaKnown RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 MDGA2Q7Z553 956 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 KLBQ86Z14 1044 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 SCN4BQ8IWT1 228 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 DDIASQ8IXT1 998 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 VPS52Q8N1B4 723 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 EXD3Q8N9H8 876 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 WIPF2Q8TF74 440 aaPredicted RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 NCSTNQ92542 709 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 RNFT2Q96EX2 444 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 ADAD1Q96M93 576 aaKnown RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 FCRL4Q96PJ5 515 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 CD180Q99467 661 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 PAIP1Q9H074 479 aaKnown RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 IRAK4Q9NWZ3 460 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 ALKBH4Q9NXW9 302 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 HSF4Q9ULV5 492 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 ARHGAP26Q9UNA1 814 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 DTX4Q9Y2E6 619 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 PKP3Q9Y446 797 aa4.49□□□□□ -1.69
CLK1-208ENST00000464454 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.49□□□□□ -1.69
CLK1-208ENST00000464454 TTBK1Q5TCY1 1321 aaPredicted RBP4.48□□□□□ -1.69
CLK1-208ENST00000464454 TRBV5-3A0A0A0MS03 114 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 KCNJ18B7U540 433 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 RHODO00212 210 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 MSI1O43347 362 aaKnown RBP4.48□□□□□ -1.69
CLK1-208ENST00000464454 HLA-DQA2P01906 255 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 ATP1A3P13637 1013 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 PRF1P14222 555 aa4.48□□□□□ -1.69
CLK1-208ENST00000464454 CIITAP33076 1130 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms