RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 E7ENQ6 273 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 HCRTO43612 131 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 SERPINA6P08185 405 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 RBP1P09455 135 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 NDUFV1P49821 464 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MMP14P50281 582 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 UBE3AQ05086 875 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 PWP1Q13610 501 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 WLSQ5T9L3 541 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 UTS2BQ765I0 119 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 OTOP3Q7RTS5 596 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 STK32CQ86UX6 486 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 SLC44A2Q8IWA5 706 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 SPATA22Q8NHS9 363 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ROGDIQ9GZN7 287 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 SFMBT1Q9UHJ3 866 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ZNF214Q9UL59 606 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 CORO1CQ9ULV4 474 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 SPEF2Q9C093 1822 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 SPDYE5A6NIY4 337 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MPOP05164 745 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 HIST1H2AGP0C0S8 130 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 PCNAP12004 261 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 TFEBP19484 476 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 HIST1H2ADP20671 130 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 OR1E1P30953 314 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ARL2P36404 184 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ATP1A4Q13733 1029 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ZNF460Q14592 562 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 C9orf131Q5VYM1 1079 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CXCL17Q6UXB2 119 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 BNIPLQ7Z465 357 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 WDR60Q8WVS4 1066 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 C10orf82Q8WW14 230 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 OTULINQ96BN8 352 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 HIST1H2AHQ96KK5 128 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 LENG8Q96PV6 779 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 HIST1H2AJQ99878 128 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 NTPCRQ9BSD7 190 aaKnown RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 H2AFJQ9BTM1 129 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 KATNAL1Q9BW62 490 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CRLS1Q9UJA2 301 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 PCDHGB4Q9UN71 923 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 KDM3BQ7LBC6 1761 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 KDM1AO60341 852 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 TBC1D4O60343 1298 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 SIN3BO75182 1162 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 PEX2P28328 305 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CLK1P49759 484 aaKnown RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 GPX6P59796 221 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CHRNB3Q05901 458 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 NET1Q7Z628 596 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 ADCK1Q86TW2 530 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 TLK2Q86UE8 772 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 BANPQ8N9N5 519 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 FNDC5Q8NAU1 212 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 LPCAT1Q8NF37 534 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 FIG4Q92562 907 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 RMND5BQ96G75 393 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 AGAP2Q99490 1192 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 GPR20Q99678 358 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MINDY3Q9H8M7 445 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 RIC8BQ9NVN3 520 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ZMYM5Q9UJ78 669 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 AGRPO00253 132 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 PRRG1O14668 218 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 MSI1O43347 362 aaKnown RBP9.21□□□□□ -0.93
HPS4-208ENST00000464362 B4GALT4O60513 344 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 CLASP2O75122 1294 aaKnown RBP9.21□□□□□ -0.93
HPS4-208ENST00000464362 ZNF682O95780 498 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 SERPIND1P05546 499 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 LMO2P25791 158 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 FMO4P31512 558 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 SEMA5AQ13591 1074 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 DCP1BQ8IZD4 617 aaKnown RBP9.21□□□□□ -0.93
HPS4-208ENST00000464362 PARP8Q8N3A8 854 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 FBXW8Q8N3Y1 598 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 SLC35B2Q8TB61 432 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 TRPC4APQ8TEL6 797 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 CACYBPQ9HB71 228 aaKnown RBP9.21□□□□□ -0.93
HPS4-208ENST00000464362 TMPRSS4Q9NRS4 437 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 DDX28Q9NUL7 540 aaKnown RBP9.21□□□□□ -0.93
HPS4-208ENST00000464362 FBXO5Q9UKT4 447 aa9.21□□□□□ -0.93
HPS4-208ENST00000464362 SLCO1B7G3V0H7 640 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 NCAM2O15394 837 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 ZBTB24O43167 697 aaPredicted RBP9.21□□□□□ -0.94
HPS4-208ENST00000464362 RAMP2O60895 175 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 AMHP03971 560 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 CCNB1P14635 433 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 SP100P23497 879 aaPredicted RBP9.21□□□□□ -0.94
HPS4-208ENST00000464362 PIK3R1P27986 724 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 GMPRP36959 345 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 CD86P42081 329 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 MATKP42679 507 aa9.21□□□□□ -0.94
HPS4-208ENST00000464362 LHX1P48742 406 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms