RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, human

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB1-208	ENST00000464001	OR2C3	Q8N628	320 aa		4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	C1orf131	Q8NDD1	294 aa	Known RBP	4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	ENGASE	Q8NFI3	743 aa		4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	STK33	Q9BYT3	514 aa		4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	CERS4	Q9HA82	394 aa		4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	ZNF304	Q9HCX3	659 aa		4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	SLC39A10	Q9ULF5	831 aa		4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	COPG1	Q9Y678	874 aa	Known RBP	4.55	□□□□□ -1.68
ITGB1-208	ENST00000464001	PIP5K1C	O60331	668 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	GLUD1	P00367	558 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	HSP90AA1	P07900	732 aa	Known RBP	4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	KLRK1	P26718	216 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	AKT1	P31749	480 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	HAL	P42357	657 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	HTR3A	P46098	478 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	GLUD2	P49448	558 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	POLE2	P56282	527 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	SELENOV	P59797	346 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	TRAF1	Q13077	416 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	ARL13A	Q5H913	290 aa	Predicted RBP	4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	ANO1	Q5XXA6	986 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	KRTAP5-11	Q6L8G4	156 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	CCDC25	Q86WR0	208 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	ANKRD42	Q8N9B4	389 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	KDM1B	Q8NB78	822 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	VPS37A	Q8NEZ2	397 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	LMO3	Q8TAP4	145 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	IPO4	Q8TEX9	1081 aa	Known RBP	4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	DNASE2B	Q8WZ79	361 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	CCDC138	Q96M89	665 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	PRPF18	Q99633	342 aa	Known RBP	4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	B3GNT4	Q9C0J1	378 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	PCDHGB2	Q9Y5G2	931 aa		4.54	□□□□□ -1.68
ITGB1-208	ENST00000464001	DYTN	A2CJ06	578 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	CLEC18A	A5D8T8	446 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	SAC3D1	A6NKF1	404 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	KIF28P	B7ZC32	967 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	EPB41L2	O43491	1005 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	LARGE1	O95461	756 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	PKM	P14618	531 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	CHRNB2	P17787	502 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	KLRC2	P26717	231 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	TNFSF8	P32971	234 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	ART1	P52961	327 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	ABAT	P80404	500 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	RNASEL	Q05823	741 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	TRAF2	Q12933	501 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	PICALM	Q13492	652 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	MYBPC2	Q14324	1141 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	KCTD2	Q14681	263 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	IZUMO4	Q1ZYL8	232 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	FSCB	Q5H9T9	825 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	ANKS1B	Q7Z6G8	1248 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	NR2C2AP	Q86WQ0	139 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	GATAD2A	Q86YP4	633 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	TEX19	Q8NA77	164 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	CLEC18C	Q8NCF0	446 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	BICD2	Q8TD16	824 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	MUL1	Q969V5	352 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	SORBS1	Q9BX66	1292 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	TP63	Q9H3D4	680 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	RMI1	Q9H9A7	625 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	PCDHGB1	Q9Y5G3	927 aa		4.53	□□□□□ -1.68
ITGB1-208	ENST00000464001	TRBV5-7	A0A0A0MS05	114 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	MS4A18	H0YCH9	400 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	VWA5A	O00534	786 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	DNPH1	O43598	174 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	TIMM44	O43615	452 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	NBN	O60934	754 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	RFX5	P48382	616 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	PPM1F	P49593	454 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	AK2	P54819	239 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	FAM3B	P58499	235 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	RHAG	Q02094	409 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	DUSP6	Q16828	381 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	ALF	Q53S48	1182 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	CCDC70	Q6NSX1	233 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	CCDC174	Q6PII3	467 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	USP43	Q70EL4	1123 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	CUZD1	Q86UP6	607 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	TMEM200A	Q86VY9	491 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	CPXCR1	Q8N123	301 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	CLEC4C	Q8WTT0	213 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	POLDIP3	Q9BY77	421 aa	Known RBP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	ARL15	Q9NXU5	204 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	IGSF9	Q9P2J2	1179 aa		4.52	□□□□□ -1.69
ITGB1-208	ENST00000464001	BTBD18	B2RXH4	712 aa		4.51	□□□□□ -1.69
ITGB1-208	ENST00000464001	STMND1	H3BQB6	276 aa		4.51	□□□□□ -1.69
ITGB1-208	ENST00000464001	LIAS	O43766	372 aa		4.51	□□□□□ -1.69
ITGB1-208	ENST00000464001	HOXB9	P17482	250 aa	Predicted RBP	4.51	□□□□□ -1.69
ITGB1-208	ENST00000464001	CYP2J2	P51589	502 aa		4.51	□□□□□ -1.69

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