RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SARDHQ9UL12 918 aa7.97□□□□□ -1.13
SMC3-202ENST00000462899 ATXN7L1Q9ULK2 861 aaPredicted RBP7.97□□□□□ -1.13
SMC3-202ENST00000462899 CHD5Q8TDI0 1954 aa7.97□□□□□ -1.13
SMC3-202ENST00000462899 TBC1D3DA0A087WVF3 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3IA0A087WXS9 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3EA0A087X179 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3KA0A087X1G2 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3FA6NER0 549 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3LB9A6J9 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 PRAMEF26H0Y7S4 382 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 K7ESM1 405 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 XPO1O14980 1071 aaKnown RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 SCAMP1O15126 338 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 CASC3O15234 703 aaKnown RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 FFAR2O15552 330 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 KLRC4O43908 158 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 ACSL4O60488 711 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 ITGB2P05107 769 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3HP0C7X1 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 THEGLP0DJG4 465 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 GP1BBP13224 206 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 CD58P19256 250 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 MAT2AP31153 395 aaKnown RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 PIK3CAP42336 1068 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 ABL2P42684 1182 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 NASPP49321 788 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 STK19P49842 368 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 DAOAP59103 153 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 ST8SIA6P61647 398 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 RPS24P62847 133 aaKnown RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 PPP3CAQ08209 521 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 SRSF6Q13247 344 aaKnown RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 RABEP1Q15276 862 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 SETMARQ53H47 684 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 BSPRYQ5W0U4 402 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3GQ6DHY5 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3CQ6IPX1 549 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 GCNT7Q6ZNI0 430 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 ABI3BPQ7Z7G0 1075 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 PRPF39Q86UA1 669 aaKnown RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 TBC1D3Q8IZP1 549 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 HJURPQ8NCD3 748 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 KIAA0895Q8NCT3 520 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 GOLGA5Q8TBA6 731 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 IFI44Q8TCB0 444 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 EDEM1Q92611 657 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 FAXDC2Q96IV6 333 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 SPAG5Q96R06 1193 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 CCNL2Q96S94 520 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 LRRC27Q9C0I9 530 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 PREBQ9HCU5 417 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 SLC39A2Q9NP94 309 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 ABCC13Q9NSE7 274 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 SMC3Q9UQE7 1217 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 HEMK1Q9Y5R4 338 aaPredicted RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 PRRC2CQ9Y520 2896 aaKnown RBP7.96□□□□□ -1.14
SMC3-202ENST00000462899 FBN2P35556 2912 aa7.96□□□□□ -1.14
SMC3-202ENST00000462899 PVALEFA0A1B0GWK0 134 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 EME2A4GXA9 379 aaPredicted RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 MAPK13O15264 365 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 TCEA3O75764 348 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 LUC7L3O95232 432 aaKnown RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 KIF20AO95235 890 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 IL1BP01584 269 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 ITGA2BP08514 1039 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 TRIM21P19474 475 aaKnown RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 CR2P20023 1033 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 RBMS1P29558 406 aaKnown RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 DUSP3P51452 185 aaPredicted RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 ECT2LQ008S8 904 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 ENPEPQ07075 957 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 ADIGQ0VDE8 80 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 CNTN1Q12860 1018 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 UBAP2LQ14157 1087 aaKnown RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 STAT4Q14765 748 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 ZNF394Q53GI3 561 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 MS4A13Q5J8X5 152 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 PIP5KL1Q5T9C9 394 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 NUGGCQ68CJ6 796 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 GUSBP11Q6P575 273 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 APCDD1Q8J025 514 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 OR13H1Q8NG92 308 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 MAPK15Q8TD08 544 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 KCTD13Q8WZ19 329 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 EXTL1Q92935 676 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 KLHDC7BQ96G42 594 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 SLC39A13Q96H72 371 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 POM121Q96HA1 1249 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 RPL10LQ96L21 214 aaKnown RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 FCRL2Q96LA5 508 aaPredicted RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 NOX5Q96PH1 765 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 DUSP23Q9BVJ7 150 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 NUCKS1Q9H1E3 243 aaKnown RBP7.95□□□□□ -1.14
SMC3-202ENST00000462899 MAGEF1Q9HAY2 307 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 CISHQ9NSE2 258 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 PPM1HQ9ULR3 514 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 PCDHGA7Q9Y5G6 932 aa7.95□□□□□ -1.14
SMC3-202ENST00000462899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms