RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 SH3RF2Q8TEC5 729 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 RUBCNQ92622 972 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 TRPV5Q9NQA5 729 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 SPATA7Q9P0W8 599 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 STIM2Q9P246 746 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 CLDN11O75508 207 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 YBEYP58557 167 aaPredicted RBP12.37□□□□□ -0.43
RAE1-207ENST00000462438 SETD3Q86TU7 594 aaPredicted RBP12.37□□□□□ -0.43
RAE1-207ENST00000462438 PLD5Q8N7P1 536 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 ZSCAN18Q8TBC5 510 aaPredicted RBP12.37□□□□□ -0.43
RAE1-207ENST00000462438 CLIP3Q96DZ5 547 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 SLC2A11Q9BYW1 496 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 KLC2Q9H0B6 622 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 SLITRK6Q9H5Y7 841 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 NUDT5Q9UKK9 219 aa12.37□□□□□ -0.43
RAE1-207ENST00000462438 CORO1CQ9ULV4 474 aaPredicted RBP12.37□□□□□ -0.43
RAE1-207ENST00000462438 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 SMIM23A6NLE4 172 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 PENKP01210 267 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 FGGP02679 453 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 NOMO1Q15155 1222 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 STXBP5Q5T5C0 1151 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 NCBP2-AS2Q69YL0 99 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 POTEHQ6S545 545 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 SYDE1Q6ZW31 735 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 ARID3BQ8IVW6 561 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 MMGT1Q8N4V1 131 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 CFAP97Q9P2B7 532 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 CHMP2BQ9UQN3 213 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 FAM50BQ9Y247 325 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 TBC1D30Q9Y2I9 924 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 DOCK6Q96HP0 2047 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 A0A1B0GVM2 712 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 CFAP69A5D8W1 941 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 CD48P09326 243 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 CHRNA3P32297 505 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 DLX2Q07687 328 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 SLC12A1Q13621 1099 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 CBX2Q14781 532 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 FAM78AQ5JUQ0 283 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 FBXL22Q6P050 247 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 ANKS1BQ7Z6G8 1248 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 SLC35B2Q8TB61 432 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 OSCP1Q8WVF1 389 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 RTP4Q96DX8 246 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 TSGA13Q96PP4 275 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 PCYOX1Q9UHG3 505 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 USP15Q9Y4E8 981 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 FAM72CH0Y354 149 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 HOXC11O43248 304 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 MBTPS2O43462 519 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 PHF2O75151 1096 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 PRAMEF12O95522 483 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 FOSL2P15408 326 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 GOT1P17174 413 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 ETFBP38117 255 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 LMNB2Q03252 620 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 GLE1Q53GS7 698 aaKnown RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 FAM72AQ5TYM5 149 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 FAM72DQ6L9T8 149 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 FAM72BQ86X60 149 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.36□□□□□ -0.43
RAE1-207ENST00000462438 RNF25Q96BH1 459 aaPredicted RBP12.36□□□□□ -0.43
RAE1-207ENST00000462438 ZSWIM3Q96MP5 696 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 CYP2S1Q96SQ9 504 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 GPATCH2LQ9NWQ4 482 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 NR2E1Q9Y466 385 aa12.36□□□□□ -0.43
RAE1-207ENST00000462438 LAMP2P13473 410 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 MX2P20592 715 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 GALNT2Q10471 571 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 SMAD2Q15796 467 aaKnown RBP12.35□□□□□ -0.43
RAE1-207ENST00000462438 PARP15Q460N3 678 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 CHSY1Q86X52 802 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 MFSD6LQ8IWD5 586 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 CCDC63Q8NA47 563 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 MYLIPQ8WY64 445 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 IFT81Q8WYA0 676 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 CALN1Q9BXU9 219 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 GKN1Q9NS71 199 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
RAE1-207ENST00000462438 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 SYNJ2BP-COX16A0A087WUM0 186 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 H0Y3Z8 333 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 CSPG5O95196 566 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 ITGAVP06756 1048 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 HNRNPCP07910 306 aaKnown RBP eCLIP12.35□□□□□ -0.436e-6■■■□□ 18.7
RAE1-207ENST00000462438 IGFBP4P22692 258 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 SLC6A4P31645 630 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 PLK1P53350 603 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 C4orf22Q6V702 233 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 DENND1CQ8IV53 801 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
RAE1-207ENST00000462438 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms