RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TCRBV5S1A1TA0A578 114 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 DRGXA6NNA5 263 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 OPHN1O60890 802 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 FTLP02792 175 aaPredicted RBP15.78■□□□□ 0.12
VARS-219ENST00000461328 SERPING1P05155 500 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 PSMA2P25787 234 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 PSMD8P48556 350 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 EFHC2Q5JST6 749 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 USP30Q70CQ3 517 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 TMC6Q7Z403 805 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 SLFN11Q7Z7L1 901 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 DNAAF5Q86Y56 855 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 DRC7Q8IY82 874 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 OR2I1PQ8NGU4 316 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 CENPIQ92674 756 aaPredicted RBP15.78■□□□□ 0.12
VARS-219ENST00000461328 SYN2Q92777 582 aaPredicted RBP15.78■□□□□ 0.12
VARS-219ENST00000461328 C6orf106Q9H6K1 298 aaPredicted RBP15.78■□□□□ 0.12
VARS-219ENST00000461328 SGK2Q9HBY8 427 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 MYO1AQ9UBC5 1043 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 CNOT8Q9UFF9 292 aaKnown RBP15.78■□□□□ 0.12
VARS-219ENST00000461328 OR12D3Q9UGF7 316 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 EIF2B4Q9UI10 523 aaKnown RBP15.78■□□□□ 0.12
VARS-219ENST00000461328 CAPN11Q9UMQ6 739 aa15.78■□□□□ 0.12
VARS-219ENST00000461328 FAM47DPA6NHR8 397 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 GIPC1O14908 333 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 MID1O15344 667 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 BCAT2O15382 392 aaPredicted RBP15.77■□□□□ 0.12
VARS-219ENST00000461328 RTN2O75298 545 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 RNASEH2AO75792 299 aaKnown RBP15.77■□□□□ 0.12
VARS-219ENST00000461328 GYPCP04921 128 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 PLEKP08567 350 aaPredicted RBP15.77■□□□□ 0.12
VARS-219ENST00000461328 TPM1P09493 284 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 GZMAP12544 262 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 CSRP1P21291 193 aaKnown RBP15.77■□□□□ 0.12
VARS-219ENST00000461328 MAMLD1Q13495 774 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 ELAVL3Q14576 367 aaKnown RBP15.77■□□□□ 0.12
VARS-219ENST00000461328 PPP1R15BQ5SWA1 713 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 STK40Q8N2I9 435 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 NTAN1Q96AB6 310 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 TBC1D31Q96DN5 1066 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 ALG14Q96F25 216 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 OMDQ99983 421 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 SPON2Q9BUD6 331 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 ZDHHC5Q9C0B5 715 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 SLC32A1Q9H598 525 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 PPARGC1AQ9UBK2 798 aaKnown RBP15.77■□□□□ 0.12
VARS-219ENST00000461328 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.77■□□□□ 0.12
VARS-219ENST00000461328 SCINQ9Y6U3 715 aa15.77■□□□□ 0.12
VARS-219ENST00000461328 PI4KAP42356 2102 aa15.77■□□□□ 0.11
VARS-219ENST00000461328 PCDH15Q96QU1 1955 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 A0A1W2PP55 124 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 BNIP3LO60238 219 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 SNAP91O60641 907 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 FSBPO95073 299 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 IL1BP01584 269 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 MYBL1P10243 752 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 CEACAM1P13688 526 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 VAV1P15498 845 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 CASP14P31944 242 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 SLC8A1P32418 973 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 ZNF252P-AS1Q0IIN9 211 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 GRIK2Q13002 908 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 TRIM14Q14142 442 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 PLEKHA7Q6IQ23 1121 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 DCAF4L2Q8NA75 395 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 ATP11CQ8NB49 1132 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 DEFB124Q8NES8 71 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 OR7D4Q8NG98 312 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 PTPRN2Q92932 1015 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 BIRC7Q96CA5 298 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 EPAS1Q99814 870 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 OSBPL2Q9H1P3 480 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 ATP13A1Q9HD20 1204 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 SERGEFQ9UGK8 458 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 ADAMTS1Q9UHI8 967 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 VPS51Q9UID3 782 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 OR51B4Q9Y5P0 310 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 ADAMTS9Q9P2N4 1935 aa15.76■□□□□ 0.11
VARS-219ENST00000461328 A0A0D9SEW6 157 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 ILVBLA1L0T0 632 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 CBX4O00257 560 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 ATP9BO43861 1147 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 CREB3O43889 395 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 LRIG2O94898 1065 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 ADH1BP00325 375 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 RHOQP17081 205 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 C5AR1P21730 350 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 VASPP50552 380 aaPredicted RBP15.75■□□□□ 0.11
VARS-219ENST00000461328 OGDHQ02218 1023 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 NRG1Q02297 640 aaPredicted RBP15.75■□□□□ 0.11
VARS-219ENST00000461328 SCAPQ12770 1279 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 SEMA3BQ13214 749 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 HGSNATQ68CP4 663 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 KIAA0895LQ68EN5 471 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 SPECC1LQ69YQ0 1117 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 LINGO4Q6UY18 593 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 ZNF783Q6ZMS7 281 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 Q6ZVU0 165 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 DSG4Q86SJ6 1040 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 ZNF354CQ86Y25 554 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms