RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SELENOOQ9BVL4 669 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 OSBPL6Q9BZF3 934 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 LRRC27Q9C0I9 530 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 IQCGQ9H095 443 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 GOLPH3LQ9H4A5 285 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 ZSCAN16Q9H4T2 348 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 ATP6V0A4Q9HBG4 840 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 XPNPEP1Q9NQW7 623 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 DDX19AQ9NUU7 478 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 TDP1Q9NUW8 608 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 POLR3BQ9NW08 1133 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 ERAP1Q9NZ08 941 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 RCOR1Q9UKL0 485 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 TBX21Q9UL17 535 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 GINS2Q9Y248 185 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 EMSYQ7Z589 1322 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 ATRXP46100 2492 aa5.14□□□□□ -1.59
ATPAF1-203ENST00000460928 UNC79Q9P2D8 2635 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 A0A1B0GVL5 298 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 CAPN14A8MX76 684 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 RSPH10B2B2RC85 870 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 H3BUI4 141 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 USO1O60763 962 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 PHF2O75151 1096 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ENDOD1O94919 500 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 FSBPO95073 299 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 C22orf31O95567 290 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 CHRNA1P02708 482 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ADH4P08319 380 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 LTA4HP09960 611 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 RSPH10BP0C881 870 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 CSF2RAP15509 400 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 MAKP20794 623 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 HOXC8P31273 242 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 YWHABP31946 246 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ME1P48163 572 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 SESN2P58004 480 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 PSMC5P62195 406 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 CDC42EP1Q00587 391 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 MEF2AQ02078 507 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 NCBP1Q09161 790 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 RIN1Q13671 783 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 TMEM95Q3KNT9 176 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 KHDC1Q4VXA5 237 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 DNAJC21Q5F1R6 531 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 C9orf50Q5SZB4 431 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 EFCAB12Q6NXP0 572 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 NFRKBQ6P4R8 1299 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 MTHFD1LQ6UB35 978 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 Q6ZVL8 140 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 PLPPR4Q7Z2D5 763 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ANKRD33Q7Z3H0 272 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 LDLRAD3Q86YD5 345 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 MYLK4Q86YV6 388 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 LINC01465Q8N7H1 131 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 USP38Q8NB14 1042 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 DRAXINQ8NBI3 349 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 CCDC26Q8TAB7 109 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 AFAP1L1Q8TED9 768 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 SNX33Q8WV41 574 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 POF1BQ8WVV4 589 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ATXN2LQ8WWM7 1075 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 HOXB13Q92826 284 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 MIEF2Q96C03 454 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 CEP170P1Q96L14 293 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 WDR92Q96MX6 357 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ZNF396Q96N95 335 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ASB2Q96Q27 587 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 KIFC3Q9BVG8 833 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 HIPK3Q9H422 1215 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 MANSC1Q9H8J5 431 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ZMAT3Q9HA38 289 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 LMBRD1Q9NUN5 540 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 BLOC1S4Q9NUP1 217 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 SPATS2LQ9NUQ6 558 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 UTP6Q9NYH9 597 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 TUBE1Q9UJT0 475 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ZNF215Q9UL58 517 aaPredicted RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 FRMD4BQ9Y2L6 1034 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 RRP15Q9Y3B9 282 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 PCDHA3Q9Y5H8 950 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 SRPRBQ9Y5M8 271 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 MYO7AQ13402 2215 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 ZFHX4Q86UP3 3567 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 LTBP2Q14767 1821 aa5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 TCF20Q9UGU0 1960 aaKnown RBP5.13□□□□□ -1.59
ATPAF1-203ENST00000460928 KMT2BQ9UMN6 2715 aaPredicted RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 A0A087X1B8 175 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 ERICH4A6NGS2 130 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 GRXCR1A8MXD5 290 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 KIAA0355O15063 1070 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 KPNA5O15131 536 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 PHGDHO43175 533 aaKnown RBP5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 FRS3O43559 492 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 SH3BP5O60239 455 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 HBP1O60381 514 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 NBNO60934 754 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 CABYRO75952 493 aa5.12□□□□□ -1.59
ATPAF1-203ENST00000460928 EDN1P05305 212 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms