RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TRPV2Q9Y5S1 764 aa15.72■□□□□ 0.11
LMNB1-203ENST00000460265 TRIP12Q14669 1992 aaPredicted RBP15.72■□□□□ 0.11
LMNB1-203ENST00000460265 GPR182O15218 404 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 ZBTB24O43167 697 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 CIB2O75838 187 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 ZNF24P17028 368 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 NFKB1P19838 968 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 CYP4V2Q6ZWL3 525 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 CLNKQ7Z7G1 428 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 NSL1Q96IY1 281 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 KATNBL1Q9H079 304 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 XPNPEP3Q9NQH7 507 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 FZD10Q9ULW2 581 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 APOBEC2Q9Y235 224 aaKnown RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 TDRKHQ9Y2W6 561 aaKnown RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 ODC1P11926 461 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 MX2P20592 715 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 SERPINB6P35237 376 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 ETFBP38117 255 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 GDF6Q6KF10 455 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 TRIM67Q6ZTA4 783 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 COLEC11Q9BWP8 271 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 AGO3Q9H9G7 860 aaKnown RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 SAR1AQ9NR31 198 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 MTO1Q9Y2Z2 717 aaKnown RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 TRAFD1O14545 582 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 TRDMT1O14717 391 aaKnown RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 SERPINB9P50453 376 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 ZBTB6Q15916 424 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 NCCRP1Q6ZVX7 275 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 OTOP3Q7RTS5 596 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 RYBPQ8N488 228 aaPredicted RBP15.71■□□□□ 0.11
LMNB1-203ENST00000460265 SPATA6LQ8N4H0 392 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 ATPAF2Q8N5M1 289 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 SIGLEC10Q96LC7 697 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 APBA2Q99767 749 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 CCDC28BQ9BUN5 200 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 ARL8BQ9NVJ2 186 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 SPATA7Q9P0W8 599 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 HSFX1Q9UBD0 423 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 PSAT1Q9Y617 370 aa15.71■□□□□ 0.11
LMNB1-203ENST00000460265 E7ESA3 106 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 RNASEH1O60930 286 aaKnown RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 ZNF865P0CJ78 1059 aaPredicted RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 USP10Q14694 798 aaKnown RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 GEN1Q17RS7 908 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 MAP7D1Q3KQU3 841 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 PLEKHG4Q58EX7 1191 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 TOP6BLQ8N6T0 577 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 OR6P1Q8NGX9 317 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 SPATA22Q8NHS9 363 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 SMARCD1Q96GM5 515 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 ARHGAP39Q9C0H5 1083 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 CHRAC1Q9NRG0 131 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 MPP6Q9NZW5 540 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 GNEQ9Y223 722 aaKnown RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 PABPC4LP0CB38 370 aaKnown RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 PURAQ00577 322 aaKnown RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 UBXN11Q5T124 520 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 QKIQ96PU8 341 aaKnown RBP eCLIP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 AGAP2Q99490 1192 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 TASP1Q9H6P5 420 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 PLLPQ9Y342 182 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 PCDHA11Q9Y5I1 949 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 GOLGA8QA0A0J9YX86 632 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 GOLGA8OA6NCC3 632 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 GOLGA8NF8WBI6 632 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 DPYSL4O14531 572 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 GCATO75600 419 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 ARL1P40616 181 aaPredicted RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 AP2B1P63010 937 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 DLG2Q15700 870 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 ISLR2Q6UXK2 745 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 EXT2Q93063 718 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 PRR11Q96HE9 360 aaPredicted RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 SMOQ99835 787 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 WWP1Q9H0M0 922 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 ZNF180Q9UJW8 692 aa15.7■□□□□ 0.1
LMNB1-203ENST00000460265 FAF1Q9UNN5 650 aaPredicted RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 ZNF646O15015 1829 aaPredicted RBP15.7■□□□□ 0.1
LMNB1-203ENST00000460265 PHGDHO43175 533 aaKnown RBP15.69■□□□□ 0.1
LMNB1-203ENST00000460265 LRIG2O94898 1065 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 ASGR1P07306 291 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 ALOX15P16050 662 aaPredicted RBP15.69■□□□□ 0.1
LMNB1-203ENST00000460265 TRIM32Q13049 653 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 TAF12Q16514 161 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 SLC39A12Q504Y0 691 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 PKDCCQ504Y2 493 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 ITPRIPL1Q6GPH6 555 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 KCNN1Q92952 543 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 OXNAD1Q96HP4 312 aaPredicted RBP15.69■□□□□ 0.1
LMNB1-203ENST00000460265 TUBB6Q9BUF5 446 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 TRMT13Q9NUP7 481 aaKnown RBP15.69■□□□□ 0.1
LMNB1-203ENST00000460265 MTMR10Q9NXD2 777 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 TRIM43BA6NCK2 446 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 F8W810 466 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 TADA2AO75478 443 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 USP1O94782 785 aa15.69■□□□□ 0.1
LMNB1-203ENST00000460265 MT-CYBP00156 380 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms