RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MCF2LO15068 1137 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 PLRG1O43660 514 aaKnown RBP23.37■■□□□ 1.33
PTPN4-207ENST00000460162 CNTN5O94779 1100 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 NUDT1P36639 197 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 FLT3P36888 993 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 METAP1P53582 386 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 PPP2CBP62714 309 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 PPP2CAP67775 309 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 NOMO3P69849 1222 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 ALFQ53S48 1182 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 SLC45A4Q5BKX6 768 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 LRRC31Q6UY01 552 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.37■■□□□ 1.33
PTPN4-207ENST00000460162 ARCQ7LC44 396 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 ZNF677Q86XU0 584 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 DCAF4L2Q8NA75 395 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 ENOX1Q8TC92 643 aaKnown RBP23.37■■□□□ 1.33
PTPN4-207ENST00000460162 C1orf74Q96LT6 269 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 CCDC114Q96M63 670 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 ELF4Q99607 663 aaPredicted RBP23.37■■□□□ 1.33
PTPN4-207ENST00000460162 SARDHQ9UL12 918 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 PPM1HQ9ULR3 514 aa23.37■■□□□ 1.33
PTPN4-207ENST00000460162 IGLV3-10A0A075B6K4 115 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3DA0A087WVF3 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3IA0A087WXS9 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3EA0A087X179 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3KA0A087X1G2 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 A0A1W2PR77 199 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3FA6NER0 549 aaPredicted RBP23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3LB9A6J9 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 KCNK3O14649 394 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 YKT6O15498 198 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TNFSF14O43557 240 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 WNT1P04628 370 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 MMEP08473 750 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3HP0C7X1 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 SRCP12931 536 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 C6orf118Q5T5N4 469 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 AGBL4Q5VU57 503 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3GQ6DHY5 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3CQ6IPX1 549 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 NAPEPLDQ6IQ20 393 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 BNIPLQ7Z465 357 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TBC1D3Q8IZP1 549 aaPredicted RBP23.36■■□□□ 1.33
PTPN4-207ENST00000460162 PIP4K2CQ8TBX8 421 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 SERAC1Q96JX3 654 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 PSMB7Q99436 277 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 GANQ9H2C0 597 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 GDF3Q9NR23 364 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 VPS51Q9UID3 782 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 TMEM59LQ9UK28 342 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 DAAM1Q9Y4D1 1078 aa23.36■■□□□ 1.33
PTPN4-207ENST00000460162 SRRM3A6NNA2 597 aaPredicted RBP23.35■■□□□ 1.33
PTPN4-207ENST00000460162 DRGXA6NNA5 263 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 RTN2O75298 545 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 ATXN1LP0C7T5 689 aaKnown RBP23.35■■□□□ 1.33
PTPN4-207ENST00000460162 CLCN6P51797 869 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 IL9RQ01113 521 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 CDKAL1Q5VV42 579 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 CCNI2Q6ZMN8 369 aaPredicted RBP23.35■■□□□ 1.33
PTPN4-207ENST00000460162 TRIM69Q86WT6 500 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 NOCTQ9UK39 431 aaKnown RBP23.35■■□□□ 1.33
PTPN4-207ENST00000460162 DMTF1Q9Y222 760 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 DMXL2Q8TDJ6 3036 aa23.35■■□□□ 1.33
PTPN4-207ENST00000460162 E9PAM4 449 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 GOLGA8SH3BPF8 625 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 TPM2P07951 284 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 ZNF18P17022 549 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 CNTN1Q12860 1018 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 C2CD6Q53TS8 623 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 NAA35Q5VZE5 725 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 TRNP1Q6NT89 227 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 PRPF39Q86UA1 669 aaKnown RBP23.34■■□□□ 1.33
PTPN4-207ENST00000460162 ATP11CQ8NB49 1132 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 CFAP57Q96MR6 1250 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 HAPLN3Q96S86 360 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 LMBRD1Q9NUN5 540 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 FTSJ1Q9UET6 329 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 FARP1Q9Y4F1 1045 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-207ENST00000460162 SNX10Q9Y5X0 201 aa23.34■■□□□ 1.33
PTPN4-207ENST00000460162 ANKRD11Q6UB99 2663 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-207ENST00000460162 PLK4O00444 970 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 WNT9AO14904 365 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 SNAP91O60641 907 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 OR1E1P30953 314 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 ARRB1P49407 418 aaPredicted RBP23.33■■□□□ 1.33
PTPN4-207ENST00000460162 NXPH1P58417 271 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 KRT31Q15323 416 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 ZNF783Q6ZMS7 281 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 RBM43Q6ZSC3 357 aaKnown RBP23.33■■□□□ 1.33
PTPN4-207ENST00000460162 TMPRSS7Q7RTY8 843 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 TFAP2DQ7Z6R9 452 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 OXR1Q8N573 874 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 CPA5Q8WXQ8 436 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 PREBQ9HCU5 417 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 METTL5Q9NRN9 209 aaKnown RBP23.33■■□□□ 1.33
PTPN4-207ENST00000460162 TMPRSS4Q9NRS4 437 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 MPP6Q9NZW5 540 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 ARHGAP20Q9P2F6 1191 aa23.33■■□□□ 1.33
PTPN4-207ENST00000460162 FAM170AA1A519 330 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms