RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 EDDM13A0A1B0GTR0 161 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 ZBED1O96006 694 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 TPM3P06753 285 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 GP1BAP07359 652 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 CSKP41240 450 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 PSMD8P48556 350 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 KLK7P49862 253 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 TKTL1P51854 596 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 SLC8A3P57103 927 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 YWHAEP62258 255 aaKnown RBP17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 SKOR1P84550 965 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 NFATC3Q12968 1075 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 STAT4Q14765 748 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 PIK3R6Q5UE93 754 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 GJB7Q6PEY0 223 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 MFN1Q8IWA4 741 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 FIBINQ8TAL6 211 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 RNF139Q8WU17 664 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 FAM129BQ96TA1 746 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 KDM4CQ9H3R0 1056 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 FAM207AQ9NSI2 230 aaPredicted RBP17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 SFMBT1Q9UHJ3 866 aa17.14■□□□□ 0.33
TMEM50B-205ENST00000459909 A0A1B0GVM2 712 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 IRAK2O43187 625 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 SRPRAP08240 638 aaKnown RBP17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 DGKAP23743 735 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 RBMS1P29558 406 aaKnown RBP17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 GCNT1Q02742 428 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 NR1I3Q14994 352 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 ARHGAP44Q17R89 818 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 CCDC81Q6ZN84 652 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 BHLHA9Q7RTU4 235 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 NEK11Q8NG66 645 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 KAT5Q92993 513 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 FAM81BQ96LP2 452 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 HEXIM2Q96MH2 286 aaKnown RBP17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 ULBP1Q9BZM6 244 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 TRIM4Q9C037 500 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 XPO4Q9C0E2 1151 aaKnown RBP17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 ABCG4Q9H172 646 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 SIX2Q9NPC8 291 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 CISHQ9NSE2 258 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 CYTH4Q9UIA0 394 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 INTS6Q9UL03 887 aaKnown RBP17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 ERVW-1Q9UQF0 538 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 SIK3Q9Y2K2 1263 aa17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 ARID1BQ8NFD5 2236 aaPredicted RBP17.13■□□□□ 0.33
TMEM50B-205ENST00000459909 TTC34A8MYJ7 566 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 TERTO14746 1132 aaKnown RBP17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 LZTS3O60299 673 aaPredicted RBP17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 ZNF394Q53GI3 561 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 SGO2Q562F6 1265 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 KLHDC7AQ5VTJ3 777 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 RFWD3Q6PCD5 774 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 ENOSF1Q7L5Y1 443 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 TMC6Q7Z403 805 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 GRAMD1AQ96CP6 724 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 SLC46A1Q96NT5 459 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 EVA1BQ9NVM1 165 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 TJP2Q9UDY2 1190 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 DNAJC12Q9UKB3 198 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 SATB2Q9UPW6 733 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 PCDHB4Q9Y5E5 795 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 ITIH6Q6UXX5 1313 aa17.12■□□□□ 0.33
TMEM50B-205ENST00000459909 PRAMEF26H0Y7S4 382 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 FFAR2O15552 330 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 IL1BP01584 269 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 ALPPL2P10696 532 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 MAT2AP31153 395 aaKnown RBP17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 SLC11A2P49281 568 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 DUSP3P51452 185 aaPredicted RBP17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 RAPGEF1Q13905 1077 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 ISXQ2M1V0 245 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 C3orf38Q5JPI3 329 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 BSPRYQ5W0U4 402 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 XKR5Q6UX68 686 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 TRIM69Q86WT6 500 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 UNC45BQ8IWX7 931 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 STK40Q8N2I9 435 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 ANKRD52Q8NB46 1076 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 HJURPQ8NCD3 748 aaPredicted RBP17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 NDRG1Q92597 394 aaKnown RBP17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 EDEM1Q92611 657 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 FAM131CQ96AQ9 280 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 KLHDC7BQ96G42 594 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 KREMEN1Q96MU8 473 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 USP29Q9HBJ7 922 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 PLCB1Q9NQ66 1216 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 ABCC13Q9NSE7 274 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 KLHL11Q9NVR0 708 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 UCKL1Q9NWZ5 548 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 STIM2Q9P246 746 aa17.11■□□□□ 0.33
TMEM50B-205ENST00000459909 FHOD1Q9Y613 1164 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms