RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MAP3K7CLP57077 242 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 SESN3P58005 492 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 MRPS6P82932 125 aaKnown RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 SATB1Q01826 763 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 NRG1Q02297 640 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TMEM62Q0P6H9 643 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 ITGA9Q13797 1035 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 MAPRE2Q15555 327 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 GPR162Q16538 588 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 MORN1Q5T089 497 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 COL13A1Q5TAT6 717 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 SEL1L3Q68CR1 1132 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 PM20D1Q6GTS8 502 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 ANO7Q6IWH7 933 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 FSTL4Q6MZW2 842 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 EPGNQ6UW88 154 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 MOB2Q70IA6 237 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 PIWIL4Q7Z3Z4 852 aaKnown RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 GALNT7Q86SF2 657 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 DHDDSQ86SQ9 333 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 OSTM1Q86WC4 334 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 THEM5Q8N1Q8 247 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 ATPAF2Q8N5M1 289 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TDRD5Q8NAT2 981 aaKnown RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 SMG8Q8ND04 991 aaKnown RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 RP9Q8TA86 221 aaKnown RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 WDR60Q8WVS4 1066 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 BRI3BPQ8WY22 251 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 VPS39Q96JC1 886 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 SORT1Q99523 831 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 ACBD6Q9BR61 282 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 DRC3Q9H069 523 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TRPV6Q9H1D0 765 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 S100A14Q9HCY8 104 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TCF7L2Q9NQB0 619 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TBC1D13Q9NVG8 400 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 OXSMQ9NWU1 459 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 KLK14Q9P0G3 267 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 TMEM216Q9P0N5 145 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 C6orf203Q9P0P8 240 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 IPO11Q9UI26 975 aaKnown RBP9.01□□□□□ -0.97
HDAC3-202ENST00000459727 NUMBLQ9Y6R0 609 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 MCM3APO60318 1980 aa9.01□□□□□ -0.97
HDAC3-202ENST00000459727 EVPLQ92817 2033 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 KCNK1O00180 336 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PTGESO14684 152 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 KIF3CO14782 793 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 TNPO2O14787 897 aaKnown RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 ZBTB24O43167 697 aaPredicted RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 NPHS1O60500 1241 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 TADA2AO75478 443 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 NEBLO76041 1014 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 C2P06681 752 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 MYL3P08590 195 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 HOXC13P31276 330 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 CPOXP36551 454 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 MLH1P40692 756 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 CPA2P48052 419 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 HSPA13P48723 471 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PSEN1P49768 467 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 RPL14P50914 215 aaKnown RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 SLC12A2P55011 1212 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 DNAJB13P59910 316 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 TSPY1Q01534 308 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 SOX4Q06945 474 aaPredicted RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 HNRNPDQ14103 355 aaKnown RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 RFTN1Q14699 578 aaPredicted RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 PPP2R5DQ14738 602 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PSMD5Q16401 504 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 HSF5Q4G112 596 aaPredicted RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 SYPL2Q5VXT5 272 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 KLC3Q6P597 504 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PKN3Q6P5Z2 889 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PGM2L1Q6PCE3 622 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 ZCCHC23Q6ZST2 131 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 FAM43BQ6ZT52 329 aaPredicted RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 PAQR9Q6ZVX9 377 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 RAPH1Q70E73 1250 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 FBXW8Q8N3Y1 598 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 CPSF7Q8N684 471 aaKnown RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 C2orf69Q8N8R5 385 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 RIN3Q8TB24 985 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 RNF34Q969K3 372 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PCED1BQ96HM7 432 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 BTBD9Q96Q07 612 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 PANX3Q96QZ0 392 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 APBA2Q99767 749 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 ECSITQ9BQ95 431 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 MCMBPQ9BTE3 642 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 ACE2Q9BYF1 805 aaPredicted RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 MAGEB5Q9BZ81 275 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 CDHR5Q9HBB8 845 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 SPC25Q9HBM1 224 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 EML4Q9HC35 981 aaKnown RBP9□□□□□ -0.97
HDAC3-202ENST00000459727 CRTAC1Q9NQ79 661 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 ABCC13Q9NSE7 274 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 FAM105AQ9NUU6 356 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 NCKIPSDQ9NZQ3 722 aa9□□□□□ -0.97
HDAC3-202ENST00000459727 OR12D3Q9UGF7 316 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms