RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ERBB2P04626 1255 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 BPGMP07738 259 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 RALGPS1Q5JS13 557 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 DRICH1Q6PGQ1 229 aaPredicted RBP16.63■□□□□ 0.25
LSS-205ENST00000457828 KYAT3Q6YP21 454 aaKnown RBP16.63■□□□□ 0.25
LSS-205ENST00000457828 UNC5AQ6ZN44 842 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 KYQ8NBH2 561 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 MIPEPQ99797 713 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 CATSPERBQ9H7T0 1116 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 TLR8Q9NR97 1041 aaKnown RBP16.63■□□□□ 0.25
LSS-205ENST00000457828 NDUFA13Q9P0J0 144 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 PMM2O15305 246 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 IL1R2P27930 398 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 YWHAZP63104 245 aaKnown RBP16.63■□□□□ 0.25
LSS-205ENST00000457828 TCEAL1Q15170 157 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 PSMD5Q16401 504 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 TRIM60Q495X7 471 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 SNRNP25Q9BV90 132 aaKnown RBP16.63■□□□□ 0.25
LSS-205ENST00000457828 GOLGA8CPA6NN73 597 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 TTLL13PA6NNM8 815 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 TGDSO95455 350 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 ANO4Q32M45 955 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 C4orf22Q6V702 233 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 ANKS3Q6ZW76 656 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 OR6P1Q8NGX9 317 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 DDI1Q8WTU0 396 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 DCAKDQ8WVC6 231 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 THAP11Q96EK4 314 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 SPG21Q9NZD8 308 aa16.63■□□□□ 0.25
LSS-205ENST00000457828 CAPN8A6NHC0 703 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 CXCL14O95715 111 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 TPH1P17752 444 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 PSMC3P17980 439 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 CNTFP26441 200 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 FDFT1P37268 417 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 PLD1Q13393 1074 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 TRMT10BQ6PF06 316 aaKnown RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 GALNT15Q8N3T1 639 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 NAT8LQ8N9F0 302 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 HTR3CQ8WXA8 447 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 IARS2Q9NSE4 1012 aaKnown RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 A0A096LPK6 155 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 XYLBO75191 536 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 ZNF143P52747 638 aaPredicted RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 LIN52Q52LA3 116 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 CMC1Q7Z7K0 106 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 APBB2Q92870 758 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 MARK4Q96L34 752 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 EBNA1BP2Q99848 306 aaKnown RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 ULBP1Q9BZM6 244 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 DRC3Q9H069 523 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 MRPL46Q9H2W6 279 aaKnown RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 EFCAB1Q9HAE3 211 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 CYP4F12Q9HCS2 524 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 USP17L7P0C7H9 530 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 ETFBP38117 255 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 GP5P40197 560 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 PDAP1Q13442 181 aaKnown RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 NRF1Q16656 503 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 FAM183BPQ6ZVS7 135 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 C10orf107Q8IVU9 208 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 LRRC52Q8N7C0 313 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 C12orf29Q8N999 325 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 B3GALNT2Q8NCR0 500 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 DENND1AQ8TEH3 1009 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 EBF3Q9H4W6 596 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 MINDY3Q9H8M7 445 aa16.62■□□□□ 0.25
LSS-205ENST00000457828 SSU72Q9NP77 194 aaKnown RBP16.62■□□□□ 0.25
LSS-205ENST00000457828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.61■□□□□ 0.25
LSS-205ENST00000457828 F5H5T6 163 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 MAGEC1O60732 1142 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 SERPINB8P50452 374 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 IL1RL1Q01638 556 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 CDC16Q13042 620 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 ZNF177Q13360 481 aaPredicted RBP16.61■□□□□ 0.25
LSS-205ENST00000457828 PTK2BQ14289 1009 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 NOMO1Q15155 1222 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 PXYLP1Q8TE99 480 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 CCDC138Q96M89 665 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 TUBGCP5Q96RT8 1024 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 UBE2OQ9C0C9 1292 aaKnown RBP16.61■□□□□ 0.25
LSS-205ENST00000457828 FZD8Q9H461 694 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 WARS2Q9UGM6 360 aaKnown RBP16.61■□□□□ 0.25
LSS-205ENST00000457828 B4GALT4O60513 344 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 SPATA31D3P0C874 917 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 PEX2P28328 305 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 CHN2P52757 468 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 SH3PXD2AQ5TCZ1 1133 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 SDHAF4Q5VUM1 108 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 C9orf57Q5W0N0 161 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 C16orf87Q6PH81 154 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 SPATA31D4Q6ZUB0 917 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 NTPCRQ9BSD7 190 aaKnown RBP16.61■□□□□ 0.25
LSS-205ENST00000457828 SCAMP3O14828 347 aaKnown RBP16.61■□□□□ 0.25
LSS-205ENST00000457828 T-ENOLP0DO92 83 aa16.61■□□□□ 0.25
LSS-205ENST00000457828 GM2AP17900 193 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms