RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 GSTT2BP0CG30 244 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 TMED10P49755 219 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 LILRA4P59901 499 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 ADIGQ0VDE8 80 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 ATP1A4Q13733 1029 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 KLHL38Q2WGJ6 581 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 CES4AQ5XG92 561 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 PYROXD2Q8N2H3 581 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 GFM2Q969S9 779 aaKnown RBP13.87□□□□□ -0.19
TOP3B-213ENST00000457179 CCT7Q99832 543 aa13.87□□□□□ -0.19
TOP3B-213ENST00000457179 MYO18AQ92614 2054 aaKnown RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 AP1G1O43747 822 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 FAM58BPP0C7Q3 252 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 TAF6P49848 677 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 COPAP53621 1224 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 BCAR1P56945 870 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 XIAPP98170 497 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 ROR1Q01973 937 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 DPYSL3Q14195 570 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 KCNA10Q16322 511 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 ZNF362Q5T0B9 420 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 PPP1R2P3Q6NXS1 205 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 Q6ZNX1 250 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 CHSY1Q86X52 802 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 NAT8LQ8N9F0 302 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 PPP1R14CQ8TAE6 165 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 ACSS3Q9H6R3 686 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 TBCCD1Q9NVR7 557 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 ASNSD1Q9NWL6 643 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 THEGQ9P2T0 379 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 NUDT5Q9UKK9 219 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 APRTP07741 180 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 TKTP29401 623 aaKnown RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 CDH5P33151 784 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 DRICH1Q6PGQ1 229 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 POTEHQ6S545 545 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 PACS1Q6VY07 963 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 PPM1NQ8N819 430 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 SMG8Q8ND04 991 aaKnown RBP13.86□□□□□ -0.19
TOP3B-213ENST00000457179 LRGUKQ96M69 825 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 C20orf27Q9GZN8 174 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 CYP3A43Q9HB55 503 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 MIOSQ9NXC5 875 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 COL1A2P08123 1366 aa13.86□□□□□ -0.19
TOP3B-213ENST00000457179 IQANK1A0A1B0GTG1 560 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 PFKMP08237 780 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 RBL1P28749 1068 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 NR1H2P55055 460 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 C6orf183Q5T699 404 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 NUDCD3Q8IVD9 361 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 CPNE9Q8IYJ1 553 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 PAIP1Q9H074 479 aaKnown RBP13.85□□□□□ -0.19
TOP3B-213ENST00000457179 RBMX2Q9Y388 322 aaKnown RBP13.85□□□□□ -0.19
TOP3B-213ENST00000457179 TRIM17Q9Y577 477 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 KANSL1LA0AUZ9 987 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 NDUFB5O43674 189 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 DHRS4L1P0CG22 281 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 MRPS22P82650 360 aaKnown RBP13.85□□□□□ -0.19
TOP3B-213ENST00000457179 CACNB2Q08289 660 aaPredicted RBP13.85□□□□□ -0.19
TOP3B-213ENST00000457179 PIGZQ86VD9 579 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 NIPA2Q8N8Q9 360 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 TTC16Q8NEE8 873 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 EDEM1Q92611 657 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 ZNF512Q96ME7 567 aaPredicted RBP13.85□□□□□ -0.19
TOP3B-213ENST00000457179 LHX5Q9H2C1 402 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 PLGRKTQ9HBL7 147 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 TRNAU1APQ9NX07 287 aaKnown RBP13.85□□□□□ -0.19
TOP3B-213ENST00000457179 RNF186Q9NXI6 227 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 SEPT10Q9P0V9 454 aa13.85□□□□□ -0.19
TOP3B-213ENST00000457179 SF3B1O75533 1304 aaKnown RBP eCLIP13.84□□□□□ -0.193e-6■■■■■ 54.8
TOP3B-213ENST00000457179 TRIM49D1C9J1S8 452 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 H3BNX3 289 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 APOC4-APOC2K7ER74 178 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 ADAM23O75077 832 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 APOC2P02655 101 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 THRAP10827 490 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 NCF2P19878 526 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 BRCC3P46736 316 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 SLC5A3P53794 718 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 ITGA7Q13683 1181 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 BMPR2Q13873 1038 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 CCDC14Q49A88 953 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 FAM91A1Q658Y4 838 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 LCLAT1Q6UWP7 414 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 POLNQ7Z5Q5 900 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 PQLC1Q8N2U9 271 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 GRIN3AQ8TCU5 1115 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 JADE3Q92613 823 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 PPP1R10Q96QC0 940 aaKnown RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 COPS7BQ9H9Q2 264 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 LRRC4Q9HBW1 653 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 COQ6Q9Y2Z9 468 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 MFHAS1Q9Y4C4 1052 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 MBLAC1A4D2B0 266 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-213ENST00000457179 PTGESO14684 152 aa13.84□□□□□ -0.19
TOP3B-213ENST00000457179 ITM2AO43736 263 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms