RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ALKBH5Q6P6C2 394 aaKnown RBP17.78■□□□□ 0.44
USP39-208ENST00000455732 SLC23A3Q6PIS1 610 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 RPL10LQ96L21 214 aaKnown RBP17.78■□□□□ 0.44
USP39-208ENST00000455732 HSPA12BQ96MM6 686 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 RSPH9Q9H1X1 276 aaPredicted RBP17.78■□□□□ 0.44
USP39-208ENST00000455732 ABHD10Q9NUJ1 306 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 TMEM248Q9NWD8 314 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 SLCO3A1Q9UIG8 710 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 SLC25A13Q9UJS0 675 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 FZD10Q9ULW2 581 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 HS3ST2Q9Y278 367 aa17.78■□□□□ 0.44
USP39-208ENST00000455732 KNL1Q8NG31 2342 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 CHD5Q8TDI0 1954 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 CXorf51AA0A1B0GTR3 108 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 SSU72P8A0A1W2PR75 194 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 TTC34A8MYJ7 566 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 EIF3CLB5ME19 914 aaKnown RBP17.77■□□□□ 0.44
USP39-208ENST00000455732 SIN3BO75182 1162 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 NDUFS2O75306 463 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 ACADMP11310 421 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 HTR7P34969 479 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 RPS14P62263 151 aaKnown RBP17.77■□□□□ 0.44
USP39-208ENST00000455732 KRT83P78385 493 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 SEMA3BQ13214 749 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
USP39-208ENST00000455732 ACAP1Q15027 740 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 ASTE1Q2TB18 679 aaPredicted RBP17.77■□□□□ 0.44
USP39-208ENST00000455732 TRIM61Q5EBN2 209 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 ZNF776Q68DI1 518 aaPredicted RBP17.77■□□□□ 0.44
USP39-208ENST00000455732 SCYL2Q6P3W7 929 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 CACUL1Q86Y37 369 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 ARFGAP1Q8N6T3 406 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 FRS2Q8WU20 508 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 EIF3CQ99613 913 aaKnown RBP17.77■□□□□ 0.44
USP39-208ENST00000455732 NCAPGQ9BPX3 1015 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 TRIM7Q9C029 511 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 THAP2Q9H0W7 228 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 MTG2Q9H4K7 406 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 VPS51Q9UID3 782 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 SCML1Q9UN30 329 aa17.77■□□□□ 0.44
USP39-208ENST00000455732 PCNX2A6NKB5 2137 aa17.77■□□□□ 0.43
USP39-208ENST00000455732 TPRP12270 2363 aaKnown RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 A0A0D9SEW6 157 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 CDX4O14627 284 aaPredicted RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 CYP1A2P05177 515 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 ETFBP38117 255 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 EIF4A3P38919 411 aaKnown RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 CLCN6P51797 869 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 TBX2Q13207 712 aaPredicted RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 ELAVL3Q14576 367 aaKnown RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 SLC18A3Q16572 532 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 TTC31Q49AM3 519 aaPredicted RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 CCDC122Q5T0U0 273 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 RWDD4Q6NW29 188 aaKnown RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 CNGA4Q8IV77 575 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 SH2D3CQ8N5H7 860 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 PTPRN2Q92932 1015 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 FOXJ1Q92949 421 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 EPAS1Q99814 870 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 GPR174Q9BXC1 333 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 MAGEB5Q9BZ81 275 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 ZNHIT6Q9NWK9 470 aaKnown RBP17.76■□□□□ 0.43
USP39-208ENST00000455732 MYO1AQ9UBC5 1043 aa17.76■□□□□ 0.43
USP39-208ENST00000455732 SNAP91O60641 907 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 RNASEH1O60930 286 aaKnown RBP17.75■□□□□ 0.43
USP39-208ENST00000455732 RNF8O76064 485 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 DNTTP04053 509 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 PCK1P35558 622 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 NUMBP49757 651 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 GNA12Q03113 381 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 DUOXA1Q1HG43 343 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 TSR1Q2NL82 804 aaKnown RBP17.75■□□□□ 0.43
USP39-208ENST00000455732 IL31Q6EBC2 164 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 PSTKQ8IV42 348 aaKnown RBP17.75■□□□□ 0.43
USP39-208ENST00000455732 PYROXD2Q8N2H3 581 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 NIPA2Q8N8Q9 360 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 CADM4Q8NFZ8 388 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 OR7D4Q8NG98 312 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 CEP76Q8TAP6 659 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 DNASE2BQ8WZ79 361 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 NUSAP1Q9BXS6 441 aaKnown RBP17.75■□□□□ 0.43
USP39-208ENST00000455732 TRIM5Q9C035 493 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 RBSNQ9H1K0 784 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 CAPN10Q9HC96 672 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 ACACBO00763 2458 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 EPG5Q9HCE0 2579 aa17.75■□□□□ 0.43
USP39-208ENST00000455732 C4orf47A7E2U8 309 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 WASH4PA8MWX3 477 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 LRCH4O75427 683 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 ZMPSTE24O75844 475 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 SERPINF2P08697 491 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 SRCP12931 536 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 EPHB2P29323 1055 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 MIPP30301 263 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 GFPT1Q06210 699 aaPredicted RBP17.74■□□□□ 0.43
USP39-208ENST00000455732 PPM1JQ5JR12 505 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 CYP4V2Q6ZWL3 525 aaPredicted RBP17.74■□□□□ 0.43
USP39-208ENST00000455732 USP30Q70CQ3 517 aa17.74■□□□□ 0.43
USP39-208ENST00000455732 RTL3Q8N8U3 475 aaKnown RBP17.74■□□□□ 0.43
USP39-208ENST00000455732 PEBP4Q96S96 227 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms