RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PNPLA1Q8N8W4 532 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 ENGASEQ8NFI3 743 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 CLEC4CQ8WTT0 213 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 KAT5Q92993 513 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 TMA16Q96EY4 203 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 TOE1Q96GM8 510 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 PIWIL1Q96J94 861 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 IPO9Q96P70 1041 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 TSG101Q99816 390 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 ZSWIM1Q9BR11 485 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 GPR174Q9BXC1 333 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 TMPRSS13Q9BYE2 586 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 UBXN6Q9BZV1 441 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 CIPCQ9C0C6 399 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 MRPL18Q9H0U6 180 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 MTG2Q9H4K7 406 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 PRDM16Q9HAZ2 1276 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 IL21RQ9HBE5 538 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 LRRC4Q9HBW1 653 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 PNPLA8Q9NP80 782 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 ITM2CQ9NQX7 267 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 ELOVL2Q9NXB9 296 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 WSB2Q9NYS7 404 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 CLIC5Q9NZA1 410 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 NOP53Q9NZM5 478 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 THAP10Q9P2Z0 257 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 KLK13Q9UKR3 277 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 TSPAN16Q9UKR8 245 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 ZNF510Q9Y2H8 683 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 PCDHB4Q9Y5E5 795 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 SLCO1B1Q9Y6L6 691 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 MYLKQ15746 1914 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 ARID1BQ8NFD5 2236 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 SHROOM3Q8TF72 1996 aa4.89□□□□□ -1.63
GTF3C3-208ENST00000455546 MEI4A8MW99 385 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 F8W735 103 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 O00370 1275 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 BIN1O00499 593 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 XPO1O14980 1071 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SMAD7O15105 426 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SYNCRIPO60506 623 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 EIF4EBP3O60516 100 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 DNAJA2O60884 412 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 OPHN1O60890 802 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CYBBP04839 570 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 PGRP06401 933 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 EPHX1P07099 455 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 PROS1P07225 676 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SYPP08247 313 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 VDRP11473 427 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 NCAM1P13591 858 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 GLB1P16278 677 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 RAB6AP20340 208 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 HOXD9P28356 352 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 HLA-FP30511 346 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC6A4P31645 630 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ACSL1P33121 698 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 FMO5P49326 533 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 HARS2P49590 506 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CSNK1EP49674 416 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 COPAP53621 1224 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 STX17P56962 302 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC8A3P57103 927 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ETF1P62495 437 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 FKBP3Q00688 224 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 BST2Q10589 180 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 STARD3Q14849 445 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 MPPE1Q53F39 396 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SPDYCQ5MJ68 293 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 HP1BP3Q5SSJ5 553 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 DCAF12L1Q5VU92 463 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 KLHL10Q6JEL2 608 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 IGF2-ASQ6U949 168 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SERPINA13PQ6UXR4 307 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 UNQ6494/PRO21346Q6UXR6 183 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CHST9Q7L1S5 443 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 PIP4P1Q86T03 277 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 LSRQ86X29 649 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 MARCH9Q86YJ5 346 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CREBRFQ8IUR6 639 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ZC3H3Q8IXZ2 948 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ARHGAP18Q8N392 663 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CPXM2Q8N436 756 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CHCHD4Q8N4Q1 142 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 ZCCHC9Q8N567 271 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 BEND7Q8N7W2 519 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 UBR7Q8N806 425 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 RBBP8NLQ8NC74 664 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 LMO3Q8TAP4 145 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 CEP76Q8TAP6 659 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 WFDC5Q8TCV5 224 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 RNF139Q8WU17 664 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC35F5Q8WV83 523 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 UCMAQ8WVF2 138 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 PRCCQ92733 491 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SMARCE1Q969G3 411 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC35C1Q96A29 364 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 MYEOVQ96EZ4 313 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 SIPA1Q96FS4 1042 aa4.88□□□□□ -1.63
GTF3C3-208ENST00000455546 FANCD2OSQ96PS1 177 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms