RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ELAC1Q9H777 363 aaKnown RBP13.93□□□□□ -0.18
CLK3-203ENST00000454830 TTC24A2A3L6 582 aaPredicted RBP13.93□□□□□ -0.18
CLK3-203ENST00000454830 EDF1O60869 148 aaKnown RBP13.93□□□□□ -0.18
CLK3-203ENST00000454830 ACTN3Q08043 901 aaPredicted RBP13.93□□□□□ -0.18
CLK3-203ENST00000454830 GPR17Q13304 367 aa13.93□□□□□ -0.18
CLK3-203ENST00000454830 ZYG11BQ9C0D3 744 aa13.93□□□□□ -0.18
CLK3-203ENST00000454830 GLOD4Q9HC38 313 aa13.93□□□□□ -0.18
CLK3-203ENST00000454830 ZNF180Q9UJW8 692 aa13.93□□□□□ -0.18
CLK3-203ENST00000454830 AAR2Q9Y312 384 aaKnown RBP13.93□□□□□ -0.18
CLK3-203ENST00000454830 INPPL1O15357 1258 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ANXA9O76027 345 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 CCNCP24863 283 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 OR1E1P30953 314 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 IKBKEQ14164 716 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ANKRD20A4Q4UJ75 823 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 PPM1JQ5JR12 505 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 SPANXN3Q5MJ09 141 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 RFWD3Q6PCD5 774 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 APBB2Q92870 758 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 TMEM169Q96HH4 297 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 TRIM55Q9BYV6 548 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 KDM4CQ9H3R0 1056 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ITGA2BP08514 1039 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 KCNQ1P51787 676 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 CGB2Q6NT52 195 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 KCNMB4Q86W47 210 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ARHGAP12Q8IWW6 846 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 SCML4Q8N228 414 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 KIF2BQ8N4N8 673 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 HMCESQ96FZ2 354 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 LRRC37BQ96QE4 947 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 TBL1YQ9BQ87 522 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ECT2Q9H8V3 914 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 MOCS1Q9NZB8 636 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 STK38LQ9Y2H1 464 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ERI2A8K979 691 aaKnown RBP13.92□□□□□ -0.18
CLK3-203ENST00000454830 RFPL1O75677 317 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 IGLV3-25P01717 112 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 HLA-DQB2P05538 268 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ALADP13716 330 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 FGFR3P22607 806 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 NMBRP28336 390 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 CHRNA4P43681 627 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 ANO4Q32M45 955 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 USP41Q3LFD5 358 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 MS4A13Q5J8X5 152 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 TIGD7Q6NT04 549 aaPredicted RBP13.92□□□□□ -0.18
CLK3-203ENST00000454830 LGI2Q8N0V4 545 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 PAF1Q8N7H5 531 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 BCL7CQ8WUZ0 217 aaPredicted RBP13.92□□□□□ -0.18
CLK3-203ENST00000454830 ZNF778Q96MU6 729 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 SSU72Q9NP77 194 aaKnown RBP13.92□□□□□ -0.18
CLK3-203ENST00000454830 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLK3-203ENST00000454830 SMPD4Q9NXE4 827 aa13.92□□□□□ -0.18
CLK3-203ENST00000454830 J3KR12 359 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 GP5P40197 560 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 N4BP2L1Q5TBK1 243 aaPredicted RBP13.91□□□□□ -0.18
CLK3-203ENST00000454830 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 LINC00523Q86TU6 105 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 BHMTQ93088 406 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 KLHL29Q96CT2 875 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 CAB39LQ9H9S4 337 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 USH1CQ9Y6N9 552 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 MATN3O15232 486 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 MAFKO60675 156 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 ZNF189O75820 626 aaPredicted RBP13.91□□□□□ -0.18
CLK3-203ENST00000454830 MAGEA11P43364 429 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 SLC18A2Q05940 514 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 MARC1Q5VT66 337 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 FITM2Q8N6M3 262 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 AUTS2Q8WXX7 1259 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 E2F7Q96AV8 911 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 BTN2A3PQ96KV6 586 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 SLC39A10Q9ULF5 831 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 PLLPQ9Y342 182 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 STARD13Q9Y3M8 1113 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 SLC38A8A6NNN8 435 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 PRRG1O14668 218 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 RAMP2O60895 175 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 VAPBO95292 243 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 SLC4A1P02730 911 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 ELF1P32519 619 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 SPRP35270 261 aaPredicted RBP13.91□□□□□ -0.18
CLK3-203ENST00000454830 SLC18A1P54219 525 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 GEMP55040 296 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 MPP3Q13368 585 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 POLD3Q15054 466 aaPredicted RBP13.91□□□□□ -0.18
CLK3-203ENST00000454830 IGSF8Q969P0 613 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 PSMG2Q969U7 264 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 IL22Q9GZX6 179 aa13.91□□□□□ -0.18
CLK3-203ENST00000454830 OLA1Q9NTK5 396 aaKnown RBP13.91□□□□□ -0.18
CLK3-203ENST00000454830 HAPLN1P10915 354 aaPredicted RBP13.9□□□□□ -0.18
CLK3-203ENST00000454830 KCNA4P22459 653 aa13.9□□□□□ -0.18
CLK3-203ENST00000454830 CD86P42081 329 aa13.9□□□□□ -0.18
CLK3-203ENST00000454830 NPY2RP49146 381 aa13.9□□□□□ -0.18
CLK3-203ENST00000454830 NEK3P51956 506 aa13.9□□□□□ -0.18
CLK3-203ENST00000454830 PLD1Q13393 1074 aa13.9□□□□□ -0.18
CLK3-203ENST00000454830 THOC5Q13769 683 aaKnown RBP13.9□□□□□ -0.18
CLK3-203ENST00000454830 BEND5Q7L4P6 421 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms