RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 TUBP50607 506 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 C10orf120Q5SQS8 335 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 CAND1Q86VP6 1230 aaKnown RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 CIR1Q86X95 450 aaPredicted RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 WNT8BQ93098 351 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 ILKAPQ9H0C8 392 aaPredicted RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 THAP1Q9NVV9 213 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 SMPD4Q9NXE4 827 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 LSM1O15116 133 aaKnown RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 C2P06681 752 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 L1CAMP32004 1257 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 GP5P40197 560 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 LILRA4P59901 499 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 MPP1Q00013 466 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 SOX4Q06945 474 aaPredicted RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 FLOT2Q14254 428 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 FSCBQ5H9T9 825 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 NOL9Q5SY16 702 aaKnown RBP11.38□□□□□ -0.59
DDR1-240ENST00000454612 KRT80Q6KB66 452 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 TAS2R42Q7RTR8 314 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 MPP4Q96JB8 637 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 PIDD1Q9HB75 910 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 PIGVQ9NUD9 493 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 DSEQ9UL01 958 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 KIAA1257Q9ULG3 409 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 ST3GAL5Q9UNP4 418 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 ACTL7BQ9Y614 415 aa11.38□□□□□ -0.59
DDR1-240ENST00000454612 PMM2O15305 246 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PRPF4O43172 522 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■■■□ 22.5
DDR1-240ENST00000454612 TYROBPO43914 113 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 RAG1P15918 1043 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PTPN7P35236 360 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 ACADSBP45954 432 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 MAPK10P53779 464 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 SLC34A1Q06495 639 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 MED21Q13503 144 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 DCAF4L1Q3SXM0 396 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 ITPRIPL1Q6GPH6 555 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TMPRSS6Q8IU80 811 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 CCNJLQ8IV13 435 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TMCO5AQ8N6Q1 288 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TMEM174Q8WUU8 243 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TMEM40Q8WWA1 233 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 ESAMQ96AP7 390 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 FTHL17Q9BXU8 183 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 COPS7BQ9H9Q2 264 aaPredicted RBP11.37□□□□□ -0.59
DDR1-240ENST00000454612 NMRAL1Q9HBL8 299 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TCF7L2Q9NQB0 619 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 MYH9P35579 1960 aaKnown RBP11.37□□□□□ -0.59
DDR1-240ENST00000454612 EVPLQ92817 2033 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TMEM233B4DJY2 109 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 MAP3K13O43283 966 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TADA2AO75478 443 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 CCR1P32246 355 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 STX1BP61266 288 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 SNX17Q15036 470 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 ULK2Q8IYT8 1036 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 THEM5Q8N1Q8 247 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 ZNF781Q8N8C0 355 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 GIPC2Q8TF65 315 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 HBEGFQ99075 208 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 NDEL1Q9GZM8 345 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 POPDC2Q9HBU9 364 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PDP2Q9P2J9 529 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 FAM50BQ9Y247 325 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 CDY2AQ9Y6F7 541 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 STYXL1Q9Y6J8 313 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 URB1O60287 2271 aaKnown RBP11.37□□□□□ -0.59
DDR1-240ENST00000454612 RNF103-CHMP3A0A140T963 221 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 STX16-NPEPL1H3BU86 382 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PEX11AO75192 247 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TBX18O95935 607 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 BPGMP07738 259 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 TPBGLP0DKB5 382 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 ALADP13716 330 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 NMBRP28336 390 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 MATKP42679 507 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PSEN2P49810 448 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PPIL2Q13356 520 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 AGKQ53H12 422 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PITRM1Q5JRX3 1037 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 CFAP52Q8N1V2 620 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PLD6Q8N2A8 252 aaKnown RBP11.37□□□□□ -0.59
DDR1-240ENST00000454612 OR52K2Q8NGK3 314 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 SLCO2A1Q92959 643 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 ADAM2Q99965 735 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 PREBQ9HCU5 417 aa11.37□□□□□ -0.59
DDR1-240ENST00000454612 DNAAF2Q9NVR5 837 aaKnown RBP11.37□□□□□ -0.59
DDR1-240ENST00000454612 NUP205Q92621 2012 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 PRKCGP05129 697 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 MMP3P08254 477 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 VAV1P15498 845 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 EEF1B2P24534 225 aaKnown RBP11.36□□□□□ -0.59
DDR1-240ENST00000454612 SLC39A12Q504Y0 691 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 C16orf87Q6PH81 154 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 TMC7Q7Z402 723 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 CHSY1Q86X52 802 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 GALNT15Q8N3T1 639 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 URGCPQ8TCY9 931 aa11.36□□□□□ -0.59
DDR1-240ENST00000454612 UTP4Q969X6 686 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms