RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DCAF4L2Q8NA75 395 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 RPLP0P6Q8NHW5 317 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 SPON2Q9BUD6 331 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 SLC39A8Q9C0K1 460 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 MAGEH1Q9H213 219 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 LRRC19Q9H756 370 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 ATP13A1Q9HD20 1204 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 VPS51Q9UID3 782 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 STARD13Q9Y3M8 1113 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 MRFAP1Q9Y605 127 aa13.34□□□□□ -0.27
VPS33A-202ENST00000451053 NCOR1O75376 2440 aa13.33□□□□□ -0.27
VPS33A-202ENST00000451053 hCG_1818297A0A087WSY0 165 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 TIMM44O43615 452 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ZMPSTE24O75844 475 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ASLP04424 464 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 DLDP09622 509 aaKnown RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 HNRNPLP14866 589 aaKnown RBP eCLIP13.33□□□□□ -0.283e-7■□□□□ 11.2
VPS33A-202ENST00000451053 CXCR5P32302 372 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 RPS9P46781 194 aaKnown RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 STK19P49842 368 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 CLCN5P51795 746 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 NDST2P52849 883 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 YBEYP58557 167 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 DYNLT1P63172 113 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ECT2LQ008S8 904 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ADCY2Q08462 1091 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ZNF234Q14588 700 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 PAFAH1B3Q15102 231 aaKnown RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 PARP15Q460N3 678 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 KAZNQ674X7 775 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 SLC9A4Q6AI14 798 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 IL31Q6EBC2 164 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 SYNPOQ8N3V7 929 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 FBXL6Q8N531 539 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 CCDC33Q8N5R6 958 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 PLD5Q8N7P1 536 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 TMEM105Q8N8V8 129 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ACTRT1Q8TDG2 376 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 RPL10LQ96L21 214 aaKnown RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 MRGPRX3Q96LB0 322 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 HERPUD2Q9BSE4 406 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 C2orf49Q9BVC5 232 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ACE2Q9BYF1 805 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 CHRDQ9H2X0 955 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 POLR3BQ9NW08 1133 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 CACNA2D2Q9NY47 1150 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 DONSONQ9NYP3 566 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 THAP10Q9P2Z0 257 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 TTC7AQ9ULT0 858 aaPredicted RBP13.33□□□□□ -0.28
VPS33A-202ENST00000451053 ERVW-1Q9UQF0 538 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 VCANP13611 3396 aa13.33□□□□□ -0.28
VPS33A-202ENST00000451053 CHD5Q8TDI0 1954 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 NYNRINQ9P2P1 1898 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 WASH3PC4AMC7 463 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 CBX4O00257 560 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 PGRMC1O00264 195 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 DFFAO00273 331 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 APOL1O14791 398 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 CEP104O60308 925 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 MAP3K6O95382 1288 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 ATP5BP06576 529 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 PTPN7P35236 360 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 SERPINB6P35237 376 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 ETFBP38117 255 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 IL12RB1P42701 662 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 WASP42768 502 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 PAPOLAP51003 745 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 ARF5P84085 180 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 GBE1Q04446 702 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 SULT2A1Q06520 285 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 SLC10A2Q12908 348 aaPredicted RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 SERINC3Q13530 473 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 FNDC3BQ53EP0 1204 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 NPNTQ6UXI9 565 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 LINGO4Q6UY18 593 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 LEKR1Q6ZMV7 388 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 ARHGAP36Q6ZRI8 547 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 ZNF354CQ86Y25 554 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 RASGEF1CQ8N431 466 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 LZTR1Q8N653 840 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 ZNF366Q8N895 744 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 CEP112Q8N8E3 955 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 TXNDC5Q8NBS9 432 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 MYO19Q96H55 970 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 MAK16Q9BXY0 300 aaKnown RBP13.32□□□□□ -0.28
VPS33A-202ENST00000451053 L2HGDHQ9H9P8 463 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 C2orf42Q9NWW7 574 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 SLCO3A1Q9UIG8 710 aa13.32□□□□□ -0.28
VPS33A-202ENST00000451053 ACTL7AQ9Y615 435 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms