RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 KHDC1Q4VXA5 237 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 ASPRV1Q53RT3 343 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 INO80DQ53TQ3 878 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 INTS11Q5TA45 600 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 GRTP1Q5TC63 336 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 OGFRL1Q5TC84 451 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 ANKRD40Q6AI12 368 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TYW3Q6IPR3 259 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 EIF5AL1Q6IS14 154 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 KCTD8Q6ZWB6 473 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TRABD2AQ86V40 505 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 KBTBD6Q86V97 674 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 LACC1Q8IV20 430 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 THEMISQ8N1K5 641 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 MAGEB6Q8N7X4 407 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ACOT12Q8WYK0 555 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 C12orf43Q96C57 262 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 HYLS1Q96M11 299 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 C12orf66Q96MD2 445 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZSWIM3Q96MP5 696 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SAMD11Q96NU1 681 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 INPP4AQ96PE3 977 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 CTRCQ99895 268 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RBM4BQ9BQ04 359 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 SGIP1Q9BQI5 828 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MTG1Q9BT17 334 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 RBM4Q9BWF3 364 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 NUSAP1Q9BXS6 441 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 HDHD2Q9H0R4 259 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CATSPERZQ9NTU4 200 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ARL8BQ9NVJ2 186 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CUEDC1Q9NWM3 386 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 HOXC10Q9NYD6 342 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 IFT80Q9P2H3 777 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 MTRRQ9UBK8 725 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SEC14L4Q9UDX3 406 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TESMINQ9Y4I5 508 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 A0A088AWK7 358 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PIPSLA2A3N6 862 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TRAPPC13A5PLN9 417 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 STX16-NPEPL1H3BU86 382 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 AKAP8O43823 692 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PRPSAP2O60256 369 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CCNDBP1O95273 360 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TOP3BO95985 862 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PRKCBP05771 671 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SBK2P0C263 348 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PSKH1P11801 424 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CDK4P11802 303 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ARF4P18085 180 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 XRCC1P18887 633 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 RAB3AP20336 220 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CD9P21926 228 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 MAPK1P28482 360 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FAUP35544 74 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 ADD1P35611 737 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PHKA1P46020 1223 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GABRB2P47870 512 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ALDH9A1P49189 494 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF132P52740 706 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CDH6P55285 790 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PRMT2P55345 433 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PSMC5P62195 406 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 IFI35P80217 286 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PPARDQ03181 441 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FOXM1Q08050 763 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FRG1Q14331 258 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 COL28A1Q2UY09 1125 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ACSBG2Q5FVE4 666 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF772Q68DY9 489 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 FCRLBQ6BAA4 426 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PRR5LQ6MZQ0 368 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 METTL2BQ6P1Q9 378 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 SCYL2Q6P3W7 929 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SH3BP5LQ7L8J4 393 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 OTOAQ7RTW8 1153 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CATSPER4Q7RTX7 472 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SLC22A16Q86VW1 577 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZDHHC13Q8IUH4 622 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SLC9A9Q8IVB4 645 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CYP4Z2PQ8N1L4 340 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SRFBP1Q8NEF9 429 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 OR2T34Q8NGX1 318 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 OR2T3Q8NH03 318 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PIWIL2Q8TC59 973 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 FBXO25Q8TCJ0 367 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ADAMTS16Q8TE57 1224 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 POF1BQ8WVV4 589 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GAB3Q8WWW8 586 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PLIN2Q99541 437 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TDRD1Q9BXT4 1180 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 CELF4Q9BZC1 486 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 QRSL1Q9H0R6 528 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 GBA3Q9H227 469 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TM9SF3Q9HD45 589 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 UBE2TQ9NPD8 197 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 TRMT13Q9NUP7 481 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 AGPAT5Q9NUQ2 364 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 AASSQ9UDR5 926 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RGS17Q9UGC6 210 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms