RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PARM1Q6UWI2 310 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 B4GALNT4Q76KP1 1039 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 HLA-CQ95604 372 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 SPATA13Q96N96 652 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 ZNF599Q96NL3 588 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 PNKPQ96T60 521 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 IL12RB2Q99665 862 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 FAM129AQ9BZQ8 928 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 KIAA1522Q9P206 1035 aaPredicted RBP19.7■□□□□ 0.74
RPS28-202ENST00000449223 PAK5Q9P286 719 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 KDELR3O43731 214 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 CACNG3O60359 315 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 STK10O94804 968 aaKnown RBP19.69■□□□□ 0.74
RPS28-202ENST00000449223 TYRP14679 529 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 MCM3P25205 808 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 PTPN3P26045 913 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 PLK1P53350 603 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 CUL1Q13616 776 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 HTR4Q13639 388 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 CCDC85BQ15834 202 aaPredicted RBP19.69■□□□□ 0.74
RPS28-202ENST00000449223 ANO4Q32M45 955 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 TEX44Q53QW1 395 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 CCDC117Q8IWD4 279 aaPredicted RBP19.69■□□□□ 0.74
RPS28-202ENST00000449223 IFT20Q8IY31 132 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 TEX26Q8N6G2 289 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.69■□□□□ 0.74
RPS28-202ENST00000449223 LRRN4Q8WUT4 740 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 FEM1AQ9BSK4 669 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 EPC1Q9H2F5 836 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 EPB41L5Q9HCM4 733 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 ASIC3Q9UHC3 531 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 TRHDEQ9UKU6 1024 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 CLEC4EQ9ULY5 219 aa19.69■□□□□ 0.74
RPS28-202ENST00000449223 KIAA1549LQ6ZVL6 1849 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 NEDD8-MDP1E9PL57 170 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 KCNK1O00180 336 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 RNF103O00237 685 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 CHADO15335 359 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 SEC31AO94979 1220 aaKnown RBP19.68■□□□□ 0.74
RPS28-202ENST00000449223 CCNB1P14635 433 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 ETS1P14921 441 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 RPL22P35268 128 aaKnown RBP19.68■□□□□ 0.74
RPS28-202ENST00000449223 ACTN2P35609 894 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 GAD2Q05329 585 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 LEXMQ3ZCV2 418 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 RNF219Q5W0B1 726 aaPredicted RBP19.68■□□□□ 0.74
RPS28-202ENST00000449223 KIAA0907Q7Z7F0 614 aaPredicted RBP19.68■□□□□ 0.74
RPS28-202ENST00000449223 DCAF4L2Q8NA75 395 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 OR7D4Q8NG98 312 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 PARD6BQ9BYG5 372 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 PLA2G2FQ9BZM2 168 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 HPS4Q9NQG7 708 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 FAM114A2Q9NRY5 505 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 PLK2Q9NYY3 685 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 GRHL1Q9NZI5 618 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 WHRNQ9P202 907 aa19.68■□□□□ 0.74
RPS28-202ENST00000449223 PRUNE2Q8WUY3 3088 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 UQCRHLA0A096LP55 91 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 J3KR12 359 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ARNTLO00327 626 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 NDC80O14777 642 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 TP73O15350 636 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ZMPSTE24O75844 475 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 UQCRHP07919 91 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ZSCAN5DPP0CG00 497 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ADH5P11766 374 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 HLA-FP30511 346 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 RPL21P46778 160 aaKnown RBP19.67■□□□□ 0.74
RPS28-202ENST00000449223 NRLP54845 237 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 LMAN2Q12907 356 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ZBTB17Q13105 803 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 TRIP13Q15645 432 aaPredicted RBP19.67■□□□□ 0.74
RPS28-202ENST00000449223 SMAD2Q15796 467 aaKnown RBP19.67■□□□□ 0.74
RPS28-202ENST00000449223 ANKRD20A2Q5SQ80 823 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ANKRD20A1Q5TYW2 823 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ANKRD20A3Q5VUR7 823 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 TRIM68Q6AZZ1 485 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ETFBKMTQ8IXQ9 262 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ZNF567Q8N184 647 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.67■□□□□ 0.74
RPS28-202ENST00000449223 BHMTQ93088 406 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ACDQ96AP0 544 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 SNF8Q96H20 258 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ZNF419Q96HQ0 510 aaPredicted RBP19.67■□□□□ 0.74
RPS28-202ENST00000449223 TEKT5Q96M29 485 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 PHF7Q9BWX1 381 aaPredicted RBP19.67■□□□□ 0.74
RPS28-202ENST00000449223 MUC3BQ9H195 1237 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ECT2Q9H8V3 914 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 SP110Q9HB58 689 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 ATP13A1Q9HD20 1204 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 IGSF9Q9P2J2 1179 aa19.67■□□□□ 0.74
RPS28-202ENST00000449223 MYO18AQ92614 2054 aaKnown RBP19.67■□□□□ 0.74
RPS28-202ENST00000449223 ITIH2P19823 946 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 MZF1P28698 734 aaPredicted RBP19.66■□□□□ 0.74
RPS28-202ENST00000449223 CSKP41240 450 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 RENBPP51606 427 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 DMC1Q14565 340 aa19.66■□□□□ 0.74
RPS28-202ENST00000449223 RFTN1Q14699 578 aaPredicted RBP19.66■□□□□ 0.74
RPS28-202ENST00000449223 SKIV2LQ15477 1246 aaKnown RBP19.66■□□□□ 0.74
RPS28-202ENST00000449223 GAB4Q2WGN9 574 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms