RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PTGIRP43119 386 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 LMNB2Q03252 620 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 IL10RBQ08334 325 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 AP1B1Q10567 949 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 DHX34Q14147 1143 aaKnown RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 PLEKHG6Q3KR16 790 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 IL31Q6EBC2 164 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 CCDC105Q8IYK2 499 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 ALLCQ8N6M5 410 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 DCAF4L2Q8NA75 395 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 GRK7Q8WTQ7 553 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 HTR3CQ8WXA8 447 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 RTP4Q96DX8 246 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 CHFRQ96EP1 664 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 ABCB8Q9NUT2 735 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 DNAJC17Q9NVM6 304 aaKnown RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 FEZ2Q9UHY8 353 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 VPS28Q9UK41 221 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 INTS6Q9UL03 887 aaKnown RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 C5orf42Q9H799 3197 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 J3KR12 359 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 PRAMEF11O60813 436 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 PEX11BO96011 259 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 ASGR2P07307 311 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 PABPC1P11940 636 aaKnown RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 STIP1P31948 543 aaKnown RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 EIF2DP41214 584 aaKnown RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 DGKGP49619 791 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 GDF10P55107 478 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 ZP2Q05996 745 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 DMC1Q14565 340 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 PITRM1Q5JRX3 1037 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 HEATR6Q6AI08 1181 aaKnown RBP14.36□□□□□ -0.11
SHMT2-203ENST00000449049 APCDD1Q8J025 514 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 CSGALNACT1Q8TDX6 532 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 DNASE1L2Q92874 299 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 CCDC114Q96M63 670 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 SPON2Q9BUD6 331 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 SP110Q9HB58 689 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 NEU2Q9Y3R4 380 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 MYOFQ9NZM1 2061 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 CXorf51AA0A1B0GTR3 108 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 MATN3O15232 486 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 KCNN4O15554 427 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 MTSS1O43312 755 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 ZMPSTE24O75844 475 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 ECEL1O95672 775 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 OPRD1P41143 372 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 CLCN6P51797 869 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 DR1Q01658 176 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 FUT11Q495W5 492 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 ZNF354CQ86Y25 554 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 AHI1Q8N157 1196 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 PHTF2Q8N3S3 785 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 CCDC26Q8TAB7 109 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 TTC8Q8TAM2 541 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 MAML1Q92585 1016 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 SPTBN5Q9NRC6 3674 aaKnown RBP14.35□□□□□ -0.11
SHMT2-203ENST00000449049 SGK1O00141 431 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 TRIM24O15164 1050 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 RAD51CO43502 376 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 GLDCP23378 1020 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 SLC6A11P48066 632 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 IFI35P80217 286 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-203ENST00000449049 ARF5P84085 180 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 WASHC5Q12768 1159 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 FAM71DQ8N9W8 422 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 ACDQ96AP0 544 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 ZNF599Q96NL3 588 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 C2orf49Q9BVC5 232 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-203ENST00000449049 DEC1Q9P2X7 70 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 VPS51Q9UID3 782 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 HPCAL4Q9UM19 191 aa14.35□□□□□ -0.11
SHMT2-203ENST00000449049 NUP205Q92621 2012 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 ZSCAN5CA6NGD5 496 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-203ENST00000449049 C19orf67A6NJJ6 358 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 EFCAB8A8MWE9 144 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-203ENST00000449049 GAS8O95995 478 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 DMTNQ08495 405 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 TDGQ13569 410 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 GLE1Q53GS7 698 aaKnown RBP14.34□□□□□ -0.11
SHMT2-203ENST00000449049 GRAMD4Q6IC98 578 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 C8orf74Q6P047 294 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 SYDE1Q6ZW31 735 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-203ENST00000449049 GSTA5Q7RTV2 222 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 MAATS1Q7Z4T9 603 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 WFIKKN2Q8TEU8 576 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 IL12RB2Q99665 862 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 FERMT1Q9BQL6 677 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 SLC2A4RGQ9NR83 387 aa14.34□□□□□ -0.11
SHMT2-203ENST00000449049 C5orf60A6NFR6 353 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 FAM187AA6NFU0 413 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 KCNK1O00180 336 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 RNF103O00237 685 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 CBX4O00257 560 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 TTI1O43156 1089 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 SNAP91O60641 907 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms