RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MPP6Q9NZW5 540 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 ARHGAP20Q9P2F6 1191 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 VPS28Q9UK41 221 aa14.97□□□□□ -0.01
USP39-206ENST00000448971 ITPR1Q14643 2758 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 A0A087X0T9 212 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 SPAARA0A1B0GVQ0 90 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 FAM228BP0C875 321 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 MZF1P28698 734 aaPredicted RBP14.96□□□□□ -0.01
USP39-206ENST00000448971 ADRA1BP35368 520 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 HOXD12P35452 270 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 DPP6P42658 865 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 FAM193AP78312 1265 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 OGDHQ02218 1023 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 ACACAQ13085 2346 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 DUOXA1Q1HG43 343 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 C5orf22Q49AR2 442 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 C6orf118Q5T5N4 469 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 RWDD4Q6NW29 188 aaKnown RBP14.96□□□□□ -0.01
USP39-206ENST00000448971 SLFN11Q7Z7L1 901 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 CNGA4Q8IV77 575 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 APCDD1Q8J025 514 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 OR8K1Q8NGG5 319 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 CENPIQ92674 756 aaPredicted RBP14.96□□□□□ -0.01
USP39-206ENST00000448971 TTC17Q96AE7 1141 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 C1orf74Q96LT6 269 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 PPP1R9BQ96SB3 815 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 DNAJC7Q99615 494 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 ZYG11BQ9C0D3 744 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 RBSNQ9H1K0 784 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 ISCUQ9H1K1 167 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 CAPN10Q9HC96 672 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 CD248Q9HCU0 757 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 FSCN3Q9NQT6 498 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 SLC25A13Q9UJS0 675 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 KLK13Q9UKR3 277 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 SLC6A14Q9UN76 642 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 PCDH15Q96QU1 1955 aa14.96□□□□□ -0.01
USP39-206ENST00000448971 ATXN2Q99700 1313 aaKnown RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 LOC400499M0QZD8 3231 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 TAF4O00268 1085 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 SERPINF2P08697 491 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 OR1E1P30953 314 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 HNRNPH3P31942 346 aaKnown RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 EIF4A3P38919 411 aaKnown RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 NNMTP40261 264 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 CTSOP43234 321 aaPredicted RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 CLCN6P51797 869 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 SIM1P81133 766 aaPredicted RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 ECT2LQ008S8 904 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 GFPT1Q06210 699 aaPredicted RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 SULT2A1Q06520 285 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 CCDC122Q5T0U0 273 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 ALKBH5Q6P6C2 394 aaKnown RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 ZNF683Q8IZ20 524 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 DEFB119Q8N690 84 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 CEP76Q8TAP6 659 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 ZCCHC14Q8WYQ9 949 aaKnown RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 PRCCQ92733 491 aaPredicted RBP14.95□□□□□ -0.02
USP39-206ENST00000448971 TBC1D31Q96DN5 1066 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 MRGPRX1Q96LB2 322 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 THAP2Q9H0W7 228 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 TMEM245Q9H330 911 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 PRDM16Q9HAZ2 1276 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 OR12D3Q9UGF7 316 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 CYP8B1Q9UNU6 501 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 ERVW-1Q9UQF0 538 aa14.95□□□□□ -0.02
USP39-206ENST00000448971 IGLV3-10A0A075B6K4 115 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 DRGXA6NNA5 263 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 AP5Z1O43299 807 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 AKR1B10O60218 316 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 ZNF217O75362 1048 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 RNF8O76064 485 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 CFIP05156 583 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 SRPRAP08240 638 aaKnown RBP14.94□□□□□ -0.02
USP39-206ENST00000448971 ACADMP11310 421 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 CD59P13987 128 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 STK19P49842 368 aaPredicted RBP14.94□□□□□ -0.02
USP39-206ENST00000448971 AIF1P55008 147 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 ADKP55263 362 aaKnown RBP14.94□□□□□ -0.02
USP39-206ENST00000448971 ZNF33AQ06730 810 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 SCAPQ12770 1279 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 SETD3Q86TU7 594 aaPredicted RBP14.94□□□□□ -0.02
USP39-206ENST00000448971 TMPRSS6Q8IU80 811 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 DRC7Q8IY82 874 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 OR52K2Q8NGK3 314 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 OR2T3Q8NH03 318 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 SIPA1Q96FS4 1042 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 RPL10LQ96L21 214 aaKnown RBP14.94□□□□□ -0.02
USP39-206ENST00000448971 MRGPRX3Q96LB0 322 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 TRIM7Q9C029 511 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 MKRN2Q9H000 416 aaKnown RBP14.94□□□□□ -0.02
USP39-206ENST00000448971 OSBPL2Q9H1P3 480 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 FBRSQ9HAH7 460 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 PPARGC1AQ9UBK2 798 aaKnown RBP14.94□□□□□ -0.02
USP39-206ENST00000448971 TBC1D30Q9Y2I9 924 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 ASXL3Q9C0F0 2248 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 CABIN1Q9Y6J0 2220 aa14.94□□□□□ -0.02
USP39-206ENST00000448971 APC2O95996 2303 aa14.93□□□□□ -0.02
USP39-206ENST00000448971 IGHV1OR15-9A0A0B4J2B8 117 aa14.93□□□□□ -0.02
USP39-206ENST00000448971 SSU72P8A0A1W2PR75 194 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms