RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 DEUP1Q05D60 604 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 LIN52Q52LA3 116 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 NCBP2-AS2Q69YL0 99 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 PDPK2PQ6A1A2 396 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 ZNF598Q86UK7 904 aaKnown RBP11.69□□□□□ -0.54
GNE-203ENST00000447283 C10orf107Q8IVU9 208 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 ST13P4Q8IZP2 240 aaPredicted RBP11.69□□□□□ -0.54
GNE-203ENST00000447283 HTR3CQ8WXA8 447 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 ARNTL2Q8WYA1 636 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 OLFM3Q96PB7 478 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 CENPKQ9BS16 269 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 SPATA16Q9BXB7 569 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 KLHL4Q9C0H6 718 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 DHX35Q9H5Z1 703 aaKnown RBP11.69□□□□□ -0.54
GNE-203ENST00000447283 SLC17A6Q9P2U8 582 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 COPG2Q9UBF2 871 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 AP4E1Q9UPM8 1137 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 SLC4A7Q9Y6M7 1214 aa11.69□□□□□ -0.54
GNE-203ENST00000447283 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 CASQ2O14958 399 aaPredicted RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 CXCL10P02778 98 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 VAV1P15498 845 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 GSTT1P30711 240 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 ARRB2P32121 409 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 SCNN1AP37088 669 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 AFF1P51825 1210 aaKnown RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 SOX4Q06945 474 aaPredicted RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 DYNC1I2Q13409 638 aaKnown RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 MSLNQ13421 630 aaPredicted RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 GRM2Q14416 872 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 SFT2D3Q587I9 215 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 CASC4Q6P4E1 433 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 SLC26A7Q8TE54 656 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 TFB1MQ8WVM0 346 aaKnown RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 KCTD15Q96SI1 283 aaPredicted RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 DMAP1Q9NPF5 467 aaPredicted RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 PNPOQ9NVS9 261 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 MIOSQ9NXC5 875 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 ETAA1Q9NY74 926 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 ADAMTS6Q9UKP5 1117 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 PSAT1Q9Y617 370 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 USP3Q9Y6I4 520 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 SF3B1O75533 1304 aaKnown RBP eCLIP11.68□□□□□ -0.548e-6■■■■■ 107
GNE-203ENST00000447283 MKI67P46013 3256 aaKnown RBP11.68□□□□□ -0.54
GNE-203ENST00000447283 KLHL33A6NCF5 533 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 PEX1O43933 1283 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 RALBP11234 206 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 ITGAXP20702 1163 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 LRPAP1P30533 357 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 PNPLA4P41247 253 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 SCNN1GP51170 649 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 EPHB1P54762 984 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 MED21Q13503 144 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 CNPY1Q3B7I2 92 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 SLC26A9Q7LBE3 791 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 LINC01599Q8WXQ3 324 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 ISL2Q96A47 359 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 PRDM16Q9HAZ2 1276 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 GOLGA2P5Q9HBQ8 144 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 TMEM216Q9P0N5 145 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 POMPQ9Y244 141 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
GNE-203ENST00000447283 PPEF2O14830 753 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 OPHN1O60890 802 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 AP1G2O75843 785 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 PDE5AO76074 875 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 POMCP01189 267 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 CCDC130P13994 396 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 MX2P20592 715 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 ACAT1P24752 427 aaKnown RBP11.67□□□□□ -0.54
GNE-203ENST00000447283 MGAT1P26572 445 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 MAGEA12P43365 314 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 CRADDP78560 199 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 CCDC153Q494R4 210 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 RASIP1Q5U651 963 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 DEFB128Q7Z7B8 93 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 FBXW8Q8N3Y1 598 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 COLGALT1Q8NBJ5 622 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 ZNF560Q96MR9 790 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 B3GNT5Q9BYG0 378 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 ELAC1Q9H777 363 aaKnown RBP11.67□□□□□ -0.54
GNE-203ENST00000447283 TMEM161AQ9NX61 479 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 RCOR3Q9P2K3 495 aaPredicted RBP11.67□□□□□ -0.54
GNE-203ENST00000447283 PCDHB12Q9Y5F1 795 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 SNX9Q9Y5X1 595 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 KPNA7A9QM74 516 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 PABPC4LP0CB38 370 aaKnown RBP11.67□□□□□ -0.54
GNE-203ENST00000447283 CPA3P15088 417 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 EN2P19622 333 aaPredicted RBP11.67□□□□□ -0.54
GNE-203ENST00000447283 GP5P40197 560 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 TAF6P49848 677 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 ATXN1P54253 815 aaKnown RBP11.67□□□□□ -0.54
GNE-203ENST00000447283 AQP4P55087 323 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 MTTPP55157 894 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 FSCBQ5H9T9 825 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 LPCAT4Q643R3 524 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
GNE-203ENST00000447283 FRMD7Q6ZUT3 714 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms