RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 PRAMEF33A0A0G2JMD5 474 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 EME2A4GXA9 379 aaPredicted RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 CYB561D2O14569 222 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 FFAR2O15552 330 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 PRAMEF10O60809 474 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 EPHX1P07099 455 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ADRB2P07550 413 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 CXCL8P10145 99 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 MBL2P11226 248 aaPredicted RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 NR1D1P20393 614 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ADRA1BP35368 520 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 MAGEA11P43364 429 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 CCR5P51681 352 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 MFAP3P55082 362 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 SSRP1Q08945 709 aaKnown RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 OVGP1Q12889 678 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ZNF177Q13360 481 aaPredicted RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 PPP2R5AQ15172 486 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 GEN1Q17RS7 908 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 SEZ6Q53EL9 994 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 HS1BP3Q53T59 392 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 SLC45A4Q5BKX6 768 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 C9orf57Q5W0N0 161 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 SCARA3Q6AZY7 606 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 SP5Q6BEB4 398 aaPredicted RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 NCAPH2Q6IBW4 605 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 TCTN3Q6NUS6 607 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 NCEH1Q6PIU2 408 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 USP30Q70CQ3 517 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 RAB11FIP2Q7L804 512 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 METTL23Q86XA0 190 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 FBXO39Q8N4B4 442 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 FUBP3Q96I24 572 aaKnown RBP eCLIP3.43□□□□□ -1.86
PMS1-215ENST00000447232 SERAC1Q96JX3 654 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 C5orf34Q96MH7 638 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 TARS2Q9BW92 718 aaKnown RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 C22orf23Q9BZE7 217 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 FOXJ2Q9P0K8 574 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 PCDHA4Q9UN74 947 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ACANP16112 2415 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 PTPRJQ12913 1337 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 TDRD6O60522 2096 aaKnown RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 JMJD1CQ15652 2540 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 A0A087WWV3 80 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 K7ERI5 159 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 K7ESM1 405 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 NTN3O00634 580 aaPredicted RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 COCHO43405 550 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 LATO43561 262 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 PIAS2O75928 621 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 HGFP14210 728 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 CD82P27701 267 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 HDAC4P56524 1084 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 NOP14P78316 857 aaKnown RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 MYL7Q01449 175 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 TSPY1Q01534 308 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 INPP5AQ14642 412 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 CCDC142Q17RM4 750 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ALG1LQ6GMV1 187 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 NAPEPLDQ6IQ20 393 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 DENND5BQ6ZUT9 1274 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 HTR3DQ70Z44 454 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 CXXC5Q7LFL8 322 aaKnown RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 GDF7Q7Z4P5 450 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 B3GNT8Q7Z7M8 397 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ZNF276Q8N554 614 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 WDR48Q8TAF3 677 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 UCMAQ8WVF2 138 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ASB11Q8WXH4 323 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ZBTB45Q96K62 511 aaPredicted RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 TSPAN18Q96SJ8 248 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 ACBD6Q9BR61 282 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 MRPL4Q9BYD3 311 aaKnown RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 FBRSQ9HAH7 460 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 PREBQ9HCU5 417 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 SERGEFQ9UGK8 458 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 TPX2Q9ULW0 747 aaKnown RBP3.43□□□□□ -1.86
PMS1-215ENST00000447232 SH3BP1Q9Y3L3 701 aa3.43□□□□□ -1.86
PMS1-215ENST00000447232 NSD1Q96L73 2696 aaPredicted RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 PKDREJQ9NTG1 2253 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 TMEM200CA6NKL6 621 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 EFCAB7A8K855 629 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SCAMP1O15126 338 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 XPOTO43592 962 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 JAK2O60674 1132 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 MAGEC1O60732 1142 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 SORBS2O94875 1100 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 NADKO95544 446 aaPredicted RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 DNTTP04053 509 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 CELA3AP09093 270 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ALPPL2P10696 532 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 CYP11B2P19099 503 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 PTGER4P35408 488 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 NLRP5P59047 1200 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 LRRC14Q15048 493 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 EIF4HQ15056 248 aaKnown RBP3.42□□□□□ -1.86
PMS1-215ENST00000447232 E2F5Q15329 346 aa3.42□□□□□ -1.86
PMS1-215ENST00000447232 ZNF124Q15973 351 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms