RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 TFAP2DQ7Z6R9 452 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 MCOLN2Q8IZK6 566 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 GANCQ8TET4 914 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 FAM172AQ8WUF8 416 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 BIRC7Q96CA5 298 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 IQCDQ96DY2 449 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 EDEM3Q9BZQ6 932 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 RAB6CQ9H0N0 254 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 PABPC3Q9H361 631 aaKnown RBP14.39□□□□□ -0.11
TREX1-202ENST00000444177 GAREM1Q9H706 876 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 OSGEPQ9NPF4 335 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 FBXL12Q9NXK8 326 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 AIPL1Q9NZN9 384 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 SCML1Q9UN30 329 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 NCKAP1Q9Y2A7 1128 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 PCDHB9Q9Y5E1 797 aa14.39□□□□□ -0.11
TREX1-202ENST00000444177 A0A1W2PQJ5 194 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 SIGLEC16A6NMB1 481 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 CCP110O43303 1012 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 ATMINO43313 823 aaPredicted RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 SRGAP2O75044 1071 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 ENDOD1O94919 500 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 FSBPO95073 299 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 SKILP12757 684 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 RRM1P23921 792 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 PBX1P40424 430 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 PRKCIP41743 596 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 STK19P49842 368 aaPredicted RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 AFF3P51826 1226 aaKnown RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 PLK1P53350 603 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 SFSWAPQ12872 951 aaKnown RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 CST6Q15828 149 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 C5orf22Q49AR2 442 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 ALFQ53S48 1182 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 ACBD5Q5T8D3 534 aaPredicted RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 DCUN1D2Q6PH85 259 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 WDR59Q6PJI9 974 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 SARM1Q6SZW1 724 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 UNQ6494/PRO21346Q6UXR6 183 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 NAXDQ8IW45 347 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 ZNF683Q8IZ20 524 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 RNF214Q8ND24 703 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 OR52K2Q8NGK3 314 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 RPL10LQ96L21 214 aaKnown RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 HAPLN3Q96S86 360 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 FAM129BQ96TA1 746 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 TMEM121BQ9BXQ6 578 aaPredicted RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 MUC3BQ9H195 1237 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 TM9SF3Q9HD45 589 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 MPP6Q9NZW5 540 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 SLC25A13Q9UJS0 675 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 VPS28Q9UK41 221 aa14.38□□□□□ -0.11
TREX1-202ENST00000444177 NYNRINQ9P2P1 1898 aaKnown RBP14.38□□□□□ -0.11
TREX1-202ENST00000444177 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 TCRBV5S1A1TA0A578 114 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 MID1O15344 667 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 TRIM16O95361 564 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 CER1O95813 267 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 ZNF883P0CG24 379 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 DESP17661 470 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 CD27P26842 260 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 SLC8A1P32418 973 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 NNMTP40261 264 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 GALCP54803 685 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 HDAC4P56524 1084 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 SULT2A1Q06520 285 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 KIF19Q2TAC6 998 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 DNAAF5Q86Y56 855 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 MMAAQ8IVH4 418 aaKnown RBP14.37□□□□□ -0.11
TREX1-202ENST00000444177 CHCHD4Q8N4Q1 142 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 C1orf74Q96LT6 269 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 PPP1R9BQ96SB3 815 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 ZYG11BQ9C0D3 744 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 XPO4Q9C0E2 1151 aaKnown RBP14.37□□□□□ -0.11
TREX1-202ENST00000444177 NEUROG2Q9H2A3 272 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 TM7SF3Q9NS93 570 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 SERGEFQ9UGK8 458 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 FNDC3AQ9Y2H6 1198 aaKnown RBP14.37□□□□□ -0.11
TREX1-202ENST00000444177 NEUROG3Q9Y4Z2 214 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 ITIH6Q6UXX5 1313 aa14.37□□□□□ -0.11
TREX1-202ENST00000444177 IGLV3-10A0A075B6K4 115 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 A0A1W2PP55 124 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 FAM47DPA6NHR8 397 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 DRGXA6NNA5 263 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 DDX3XO00571 662 aaKnown RBP eCLIP14.36□□□□□ -0.11
TREX1-202ENST00000444177 CBFA2T3O75081 653 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 RNASEH2AO75792 299 aaKnown RBP14.36□□□□□ -0.11
TREX1-202ENST00000444177 IGHV4-34P06331 123 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 OR1E1P30953 314 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 ZNF143P52747 638 aaPredicted RBP14.36□□□□□ -0.11
TREX1-202ENST00000444177 RPL7AP62424 266 aaKnown RBP14.36□□□□□ -0.11
TREX1-202ENST00000444177 ZBED6P86452 979 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 TEAD4Q15561 434 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 ZNF423Q2M1K9 1284 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 PPP1R15BQ5SWA1 713 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 C6orf118Q5T5N4 469 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 KIAA0895LQ68EN5 471 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 SCYL2Q6P3W7 929 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 DBX2Q6ZNG2 339 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms