RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 HIPK3Q9H422 1215 aa4.75□□□□□ -1.65
AC003001.1-201ENST00000443247 RIPOR2Q9Y4F9 1068 aa4.75□□□□□ -1.65
AC003001.1-201ENST00000443247 RPS10-NUDT3A0A1W2PQS6 291 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 GAGE12JA6NER3 117 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 FAM90A8PA6NJQ4 464 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 SEPT4O43236 478 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 CCNT1O60563 726 aaKnown RBP4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 PEX14O75381 377 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 HLA-DQA2P01906 255 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 TFRCP02786 760 aaKnown RBP4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 KLKB1P03952 638 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 FAM90A13PP0C7W8 464 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 FAM90A24PP0C7X0 464 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 FCGR2AP12318 317 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 CYP4B1P13584 511 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 AVPR2P30518 371 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 TNFSF8P32971 234 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 TMPRSS3P57727 454 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 PLK5Q496M5 336 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 RUNDC3AQ59EK9 446 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 Q5PR19 223 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 VWA5B1Q5TIE3 1220 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 CTU1Q7Z7A3 348 aaKnown RBP4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 GALNT7Q86SF2 657 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 FAM185AQ8N0U4 392 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 THAP4Q8WY91 577 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 KTI12Q96EK9 354 aaPredicted RBP4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 ARPC5LQ9BPX5 153 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 ISCUQ9H1K1 167 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 RMI1Q9H9A7 625 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 PTPRHQ9HD43 1115 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 UPB1Q9UBR1 384 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 INSL5Q9Y5Q6 135 aa4.74□□□□□ -1.65
AC003001.1-201ENST00000443247 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 FAM155BO75949 473 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 ADD2P35612 726 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 PNPLA4P41247 253 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 CDKN2AP42771 156 aaKnown RBP4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 MCM2P49736 904 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 RPS6KA3P51812 740 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 PGGT1BP53609 377 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 ZNF484Q5JVG2 852 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 SLC16A12Q6ZSM3 486 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 BRSK2Q8IWQ3 736 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 KDM1BQ8NB78 822 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 MARK4Q96L34 752 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 WDR77Q9BQA1 342 aaPredicted RBP4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 FAM167BQ9BTA0 163 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 IFT27Q9BW83 186 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 CADM1Q9BY67 442 aaKnown RBP4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 B3GNT4Q9C0J1 378 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 CHODLQ9H9P2 273 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 KRCC1Q9NPI7 259 aaPredicted RBP4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 THAP1Q9NVV9 213 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 NCKIPSDQ9NZQ3 722 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 RAP2CQ9Y3L5 183 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 SLC4A4Q9Y6R1 1079 aa4.73□□□□□ -1.65
AC003001.1-201ENST00000443247 TMEM247A6NEH6 219 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 SPTLC2O15270 562 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 NBNO60934 754 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 TCEA3O75764 348 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 TMCC1O94876 653 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 ARSAP15289 507 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 ARRB2P32121 409 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 GRK6P43250 576 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 AARSP49588 968 aaKnown RBP eCLIP4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 THOC5Q13769 683 aaKnown RBP4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 GPR18Q14330 331 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 ANO1Q5XXA6 986 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 Q6ZTK2 550 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 CAMK1DQ8IU85 385 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 ENGASEQ8NFI3 743 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 LINS1Q8NG48 757 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 AFG1LQ8WV93 481 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 FAR1Q8WVX9 515 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 CCT6BQ92526 530 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 RILPL2Q969X0 211 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 LYZL4Q96KX0 146 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 FRG2BQ96QU4 278 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 SF3B5Q9BWJ5 86 aaKnown RBP4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 POLDIP3Q9BY77 421 aaKnown RBP4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 TWSG1Q9GZX9 223 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 MYLK2Q9H1R3 596 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 ZDHHC7Q9NXF8 308 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 KIF17Q9P2E2 1029 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 PLEKHB1Q9UF11 243 aaPredicted RBP4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 CDH22Q9UJ99 828 aa4.72□□□□□ -1.65
AC003001.1-201ENST00000443247 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 DDAH2O95865 285 aa4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 TK1P04183 234 aa4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 CYP1A2P05177 515 aa4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 UNGP13051 313 aaPredicted RBP4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 CHRNB2P17787 502 aa4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 PRKCHP24723 683 aa4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 TKTP29401 623 aaKnown RBP4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 CCKARP32238 428 aa4.71□□□□□ -1.66
AC003001.1-201ENST00000443247 RFX2P48378 723 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms