RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 CA5BQ9Y2D0 317 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 PCDHB1Q9Y5F3 818 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 OR51B4Q9Y5P0 310 aa12.24□□□□□ -0.45
TNXB-202ENST00000442721 TDRD6O60522 2096 aaKnown RBP12.23□□□□□ -0.45
TNXB-202ENST00000442721 E5RJQ4 531 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 C1QTNF3-AMACRE9PGA6 284 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 CAPN9O14815 690 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 MCF2LO15068 1137 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 DXOO77932 396 aaKnown RBP12.23□□□□□ -0.45
TNXB-202ENST00000442721 YWHAZP63104 245 aaKnown RBP12.23□□□□□ -0.45
TNXB-202ENST00000442721 NUCB2P80303 420 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 DLG2Q15700 870 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 POM121L1PQ3SYA9 428 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 RABGAP1LQ5R372 815 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 PIP5KL1Q5T9C9 394 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 FBXL22Q6P050 247 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 KDM7AQ6ZMT4 941 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 Q6ZVU0 165 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 KLHDC7BQ96G42 594 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 SLC2A13Q96QE2 648 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 MED15Q96RN5 788 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 FEM1AQ9BSK4 669 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 THAP9Q9H5L6 903 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 KLHL11Q9NVR0 708 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 UCKL1Q9NWZ5 548 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 SLC12A6Q9UHW9 1150 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 SLC25A13Q9UJS0 675 aa12.23□□□□□ -0.45
TNXB-202ENST00000442721 LY6G6EA0A0G2JKS1 128 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 ERVH48-1M5A8F1 160 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 OPA1O60313 960 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 PIAS2O75928 621 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 CTSLP07711 333 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 THEGLP0DJG4 465 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 SLC2A3P11169 496 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 CKMT1AP12532 417 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 IRAK1P51617 712 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
TNXB-202ENST00000442721 CXADRP78310 365 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 CENPCQ03188 943 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 CFHR1Q03591 330 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 KCNMA1Q12791 1236 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 CETN1Q12798 172 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 KCNH2Q12809 1159 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 TAF5Q15542 800 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 NEK5Q6P3R8 708 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 ZNF605Q86T29 641 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 SH2D3CQ8N5H7 860 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 EHBP1Q8NDI1 1231 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 ZNF248Q8NDW4 579 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 ZNF578Q96N58 590 aaPredicted RBP12.22□□□□□ -0.45
TNXB-202ENST00000442721 PPP1R9BQ96SB3 815 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 LGMNQ99538 433 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 GTPBP4Q9BZE4 634 aaKnown RBP12.22□□□□□ -0.45
TNXB-202ENST00000442721 GDPD2Q9HCC8 539 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 U3KQA8 63 aa12.22□□□□□ -0.45
TNXB-202ENST00000442721 COL27A1Q8IZC6 1860 aaPredicted RBP12.21□□□□□ -0.45
TNXB-202ENST00000442721 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.45
TNXB-202ENST00000442721 PSMA7O14818 248 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 SLC31A1O15431 190 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 LZTS3O60299 673 aaPredicted RBP12.21□□□□□ -0.45
TNXB-202ENST00000442721 SMC2O95347 1197 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 GLI1P08151 1106 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.45
TNXB-202ENST00000442721 CCR1P32246 355 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 DAB2P98082 770 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 CDK17Q00537 523 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 PDCLQ13371 301 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 AUHQ13825 339 aaKnown RBP12.21□□□□□ -0.45
TNXB-202ENST00000442721 ZNF284Q2VY69 593 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 C5orf22Q49AR2 442 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 ACCSLQ4AC99 568 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 CCDC40Q4G0X9 1142 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 TTI2Q6NXR4 508 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 FOXR2Q6PJQ5 311 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 HORMAD1Q86X24 394 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 TRIM59Q8IWR1 403 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 OR13H1Q8NG92 308 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 ZNF606Q8WXB4 792 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 SMARCE1Q969G3 411 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 IFT43Q96FT9 208 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 WBP1Q96G27 269 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
TNXB-202ENST00000442721 CAAP1Q9H8G2 361 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 FAM204AQ9H8W3 233 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 GPR27Q9NS67 375 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 ASNSD1Q9NWL6 643 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 DDIT4Q9NX09 232 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 NLGN3Q9NZ94 848 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 HS3ST2Q9Y278 367 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 TBC1D30Q9Y2I9 924 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 ATP6V1DQ9Y5K8 247 aa12.21□□□□□ -0.45
TNXB-202ENST00000442721 TENM4Q6N022 2769 aa12.21□□□□□ -0.46
TNXB-202ENST00000442721 TRPM6Q9BX84 2022 aa12.2□□□□□ -0.46
TNXB-202ENST00000442721 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.2□□□□□ -0.46
TNXB-202ENST00000442721 A0A1W2PQU0 124 aa12.2□□□□□ -0.46
TNXB-202ENST00000442721 CAPN8A6NHC0 703 aa12.2□□□□□ -0.46
TNXB-202ENST00000442721 FFAR2O15552 330 aa12.2□□□□□ -0.46
TNXB-202ENST00000442721 MED7O43513 233 aa12.2□□□□□ -0.46
TNXB-202ENST00000442721 LETM1O95202 739 aaPredicted RBP12.2□□□□□ -0.46
TNXB-202ENST00000442721 GP1BAP07359 652 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms