RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 PPARGC1AQ9UBK2 798 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 MYO16Q9Y6X6 1858 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 H3BNC9 293 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 MTSS1O43312 755 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ACSL4O60488 711 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ANP32DO95626 131 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 MBL2P11226 248 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 VAV1P15498 845 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HDCP19113 662 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 CDC25CP30307 473 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ALS2CLQ60I27 953 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 FBXL22Q6P050 247 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ARHGEF18Q6ZSZ5 1173 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HOOK3Q86VS8 718 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF683Q8IZ20 524 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 SLC22A17Q8WUG5 538 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 UBLCP1Q8WVY7 318 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 CPT1BQ92523 772 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 CELF6Q96J87 481 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 KLC2Q9H0B6 622 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 MAN1C1Q9NR34 630 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ASAH2Q9NR71 780 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 GKN1Q9NS71 199 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 YBX2Q9Y2T7 364 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 IGLV3-10A0A075B6K4 115 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 A0A0A0MRY4 1105 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 WASH4PA8MWX3 477 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 F5H5T6 163 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 CCL16O15467 120 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 SMIM24O75264 130 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 STC2O76061 302 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HSD17B3P37058 310 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 GARSP41250 739 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 PMS2P54278 862 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 PPIDQ08752 370 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 SKIDA1Q1XH10 827 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 SPDYCQ5MJ68 293 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 TXNDC8Q6A555 127 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 C16orf87Q6PH81 154 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 GAREM2Q75VX8 874 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 TMC8Q8IU68 726 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HS6ST3Q8IZP7 471 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ZCCHC9Q8N567 271 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 AZIN2Q96A70 460 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 SPATA13Q96N96 652 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 RUFY1Q96T51 708 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 PRMT1Q99873 361 aaKnown RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 LRRC3Q9BY71 257 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 TXLNGYQ9BZA5 131 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 ATXN3LQ9H3M9 355 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 HAUS2Q9NVX0 235 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 SMPD4Q9NXE4 827 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 SEPT10Q9P0V9 454 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 CIDEBQ9UHD4 219 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 DPP7Q9UHL4 492 aa8.27□□□□□ -1.09
CCDC39-201ENST00000442201 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-201ENST00000442201 DRGXA6NNA5 263 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 KCNK1O00180 336 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 RNF103O00237 685 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 OPHN1O60890 802 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 MYL4P12829 197 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 TACR2P21452 398 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 CHKAP35790 457 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 PBX2P40425 430 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 SMAD3P84022 425 aaKnown RBP8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF33AQ06730 810 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ANKRD20A2Q5SQ80 823 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ARTNQ5T4W7 220 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ANKRD20A1Q5TYW2 823 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ANKRD20A3Q5VUR7 823 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 NADSYN1Q6IA69 706 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 TFAP2DQ7Z6R9 452 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 DENND1CQ8IV53 801 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 IQCKQ8N0W5 287 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ARL14EPQ8N8R7 260 aaPredicted RBP8.26□□□□□ -1.09
CCDC39-201ENST00000442201 NAT8LQ8N9F0 302 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 PRCCQ92733 491 aaPredicted RBP8.26□□□□□ -1.09
CCDC39-201ENST00000442201 IFT43Q96FT9 208 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 CYP2S1Q96SQ9 504 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 TMEM248Q9NWD8 314 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 MSRAQ9UJ68 235 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 DFFAO00273 331 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 CLASP2O75122 1294 aaKnown RBP8.26□□□□□ -1.09
CCDC39-201ENST00000442201 RFPL2O75678 378 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 OLFM2O95897 454 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 CKMP06732 381 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 CCDC166P0CW27 439 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 IRF1P10914 325 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 EPCAMP16422 314 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 CORO1AP31146 461 aaKnown RBP8.26□□□□□ -1.09
CCDC39-201ENST00000442201 HOXA9P31269 272 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 CYP4F8P98187 520 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 RAB30Q15771 203 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ELMSAN1Q6PJG2 1045 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 NLRP14Q86W24 1093 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 LRRC49Q8IUZ0 686 aa8.26□□□□□ -1.09
CCDC39-201ENST00000442201 ARHGAP12Q8IWW6 846 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms