RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 KPNA3O00505 521 aaPredicted RBP20.49■□□□□ 0.87
UBE2F-215ENST00000441728 MCF2LO15068 1137 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 SIGLEC6O43699 453 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 ATP9BO43861 1147 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 FGFR1OPO95684 399 aaKnown RBP20.49■□□□□ 0.87
UBE2F-215ENST00000441728 GLI1P08151 1106 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 METAP1P53582 386 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 CENPCQ03188 943 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 NME3Q13232 169 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 PDCLQ13371 301 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 ZNF211Q13398 564 aaPredicted RBP20.49■□□□□ 0.87
UBE2F-215ENST00000441728 AGBL4Q5VU57 503 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 BROXQ5VW32 411 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 CXorf57Q6NSI4 855 aaKnown RBP20.49■□□□□ 0.87
UBE2F-215ENST00000441728 FBXL22Q6P050 247 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 TMEM110Q86TL2 294 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 CREBRFQ8IUR6 639 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 DEFB106AQ8N104 65 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 CACTIN-AS1Q8N1I8 211 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 ATP11CQ8NB49 1132 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 SPATA20Q8TB22 786 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 TIGD1Q96MW7 591 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 PRMT1Q99873 361 aaKnown RBP20.49■□□□□ 0.87
UBE2F-215ENST00000441728 SYNCQ9H7C4 482 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 SARDHQ9UL12 918 aa20.49■□□□□ 0.87
UBE2F-215ENST00000441728 IGSF10Q6WRI0 2623 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 TEX51A0A1B0GUA7 166 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 FFAR2O15552 330 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 HSF2BPO75031 334 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 CLDN11O75508 207 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 MT-CO3P00414 261 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 IGLV3-25P01717 112 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 RECQLP46063 649 aaPredicted RBP20.48■□□□□ 0.87
UBE2F-215ENST00000441728 VASPP50552 380 aaPredicted RBP20.48■□□□□ 0.87
UBE2F-215ENST00000441728 PITX1P78337 314 aaPredicted RBP20.48■□□□□ 0.87
UBE2F-215ENST00000441728 INSM1Q01101 510 aaPredicted RBP20.48■□□□□ 0.87
UBE2F-215ENST00000441728 AUHQ13825 339 aaKnown RBP20.48■□□□□ 0.87
UBE2F-215ENST00000441728 PROX2Q3B8N5 592 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 TMC6Q7Z403 805 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 KLK6Q92876 244 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 FEM1AQ9BSK4 669 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 ABCG4Q9H172 646 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 MAN1B1Q9UKM7 699 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 PPM1HQ9ULR3 514 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 RAI2Q9Y5P3 530 aa20.48■□□□□ 0.87
UBE2F-215ENST00000441728 A0A1W2PQU0 124 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 GRAP2O75791 330 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 PCDH8O95206 1070 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 RHOCP08134 193 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 PRLRP16471 622 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 CXADRP78310 365 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 TBC1D25Q3MII6 688 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 OR6B2Q6IFH4 312 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 TTI2Q6NXR4 508 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 NEK5Q6P3R8 708 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 KANSL1Q7Z3B3 1105 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 TRIM59Q8IWR1 403 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 SH2D3CQ8N5H7 860 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 LSM14AQ8ND56 463 aaKnown RBP20.47■□□□□ 0.87
UBE2F-215ENST00000441728 RFFLQ8WZ73 363 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 PPP1R13BQ96KQ4 1090 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 DEPDC7Q96QD5 511 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 C2orf49Q9BVC5 232 aaPredicted RBP20.47■□□□□ 0.87
UBE2F-215ENST00000441728 SIK2Q9H0K1 926 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 KLHL11Q9NVR0 708 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 ASNSD1Q9NWL6 643 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 CNTN6Q9UQ52 1028 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 CA5BQ9Y2D0 317 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 MYLKQ15746 1914 aa20.47■□□□□ 0.87
UBE2F-215ENST00000441728 LAMA5O15230 3695 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 NEMP2A6NFY4 417 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 C10orf142B7Z368 130 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 PRNPP04156 253 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
UBE2F-215ENST00000441728 HNRNPA2B1P22626 353 aaKnown RBP20.46■□□□□ 0.87
UBE2F-215ENST00000441728 DGKAP23743 735 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 DUSP3P51452 185 aaPredicted RBP20.46■□□□□ 0.87
UBE2F-215ENST00000441728 CDH4P55283 916 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 STX17P56962 302 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 PCBP4P57723 403 aaKnown RBP20.46■□□□□ 0.87
UBE2F-215ENST00000441728 KCNMA1Q12791 1236 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 TAF5Q15542 800 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 ARHGAP44Q17R89 818 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 TAF1BQ53T94 588 aaPredicted RBP20.46■□□□□ 0.87
UBE2F-215ENST00000441728 ZNF605Q86T29 641 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 DCBLD1Q8N8Z6 715 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 ZNF248Q8NDW4 579 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 OR4C6Q8NH72 309 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 FAM131CQ96AQ9 280 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 PPP1R16AQ96I34 528 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 ASXL3Q9C0F0 2248 aa20.46■□□□□ 0.87
UBE2F-215ENST00000441728 M0QYT0 321 aa20.45■□□□□ 0.86
UBE2F-215ENST00000441728 TRIM38O00635 465 aa20.45■□□□□ 0.86
UBE2F-215ENST00000441728 ZIC2O95409 532 aaPredicted RBP20.45■□□□□ 0.86
UBE2F-215ENST00000441728 CHRNA3P32297 505 aa20.45■□□□□ 0.86
UBE2F-215ENST00000441728 GGCXP38435 758 aa20.45■□□□□ 0.86
UBE2F-215ENST00000441728 PAK1Q13153 545 aa20.45■□□□□ 0.86
UBE2F-215ENST00000441728 LRRC31Q6UY01 552 aa20.45■□□□□ 0.86
UBE2F-215ENST00000441728 C11orf57Q6ZUT1 292 aaPredicted RBP20.45■□□□□ 0.86
UBE2F-215ENST00000441728 HORMAD1Q86X24 394 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms