RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ANKS4BQ8N8V4 417 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 HJURPQ8NCD3 748 aaPredicted RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 MAML1Q92585 1016 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 SIGLEC10Q96LC7 697 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 RAD9AQ99638 391 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 SLC25A51Q9H1U9 297 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 CCSER2Q9H7U1 834 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 CASS4Q9NQ75 786 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 ANLNQ9NQW6 1124 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 NLRC5Q86WI3 1866 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 TM9SF1O15321 606 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 BANF1O75531 89 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 FAM107AO95990 144 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 HSPA1AP0DMV8 641 aaKnown RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 HSPA1BP0DMV9 641 aaKnown RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 CES1P23141 567 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 OR1E1P30953 314 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 CTNNB1P35222 781 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 NRLP54845 237 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 UGP2Q16851 508 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 SYCP2LQ5T4T6 812 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 AFMIDQ63HM1 303 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 TTC19Q6DKK2 380 aaPredicted RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 FBXL22Q6P050 247 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 POTEHQ6S545 545 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 MARK2Q7KZI7 788 aaKnown RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 DNAJB7Q7Z6W7 309 aaPredicted RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.15□□□□□ -1.43
VPS50-205ENST00000441602 LEMD2Q8NC56 503 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 MGARPQ8TDB4 240 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 ZNF669Q96BR6 464 aaPredicted RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 PAIP2Q9BPZ3 127 aaKnown RBP6.15□□□□□ -1.43
VPS50-205ENST00000441602 ZBP1Q9H171 429 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 CCDC134Q9H6E4 229 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 TRPC7Q9HCX4 862 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 MPP6Q9NZW5 540 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 SEPT3Q9UH03 358 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 ZMYM5Q9UJ78 669 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 SH3BP1Q9Y3L3 701 aa6.15□□□□□ -1.43
VPS50-205ENST00000441602 FAM159BA6NKW6 160 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 F5H423 210 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 COPEO14579 308 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 TLL1O43897 1013 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 SEC24AO95486 1093 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 VNN2O95498 520 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 GLUD1P00367 558 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 C1RP00736 705 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 CORO1AP31146 461 aaKnown RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 HADHAP40939 763 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 HTRA4P83105 476 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 GAD2Q05329 585 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 RFTN1Q14699 578 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 KBTBD12Q3ZCT8 623 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 PCID2Q5JVF3 399 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 PPM1LQ5SGD2 360 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 ZNF783Q6ZMS7 281 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 NLRP9Q7RTR0 991 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 CCDC91Q7Z6B0 441 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 TFAP2DQ7Z6R9 452 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 CACNA2D3Q8IZS8 1091 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 IPMKQ8NFU5 416 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 OR52K1Q8NGK4 314 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 ACMSDQ8TDX5 336 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 ATXN2LQ8WWM7 1075 aaKnown RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 PSMG2Q969U7 264 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 GRAMD1AQ96CP6 724 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 PABPC5Q96DU9 382 aaKnown RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 SAMD11Q96NU1 681 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 DHRS4Q9BTZ2 278 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 FICDQ9BVA6 458 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 CEP41Q9BYV8 373 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 CRISPLD1Q9H336 500 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 ZFATQ9P243 1243 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 MID2Q9UJV3 735 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 RPS6KL1Q9Y6S9 549 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 PLXNA3P51805 1871 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 MYO16Q9Y6X6 1858 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 TRAV19A0A0A6YYK7 116 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 FAM237BA0A1B0GVD1 139 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 A0A1B0GVM2 712 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 TCAF2A6NFQ2 919 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 TRIM49D1C9J1S8 452 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 I6L893 689 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 MAFKO60675 156 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 TBX18O95935 607 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 DDX6P26196 483 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS50-205ENST00000441602 SPRP35270 261 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 ZBTB17Q13105 803 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 SETD3Q86TU7 594 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 ZNF557Q8N988 423 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 KREMEN2Q8NCW0 462 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 LRRC8CQ8TDW0 803 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 LRRN4Q8WUT4 740 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 CABS1Q96KC9 395 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 SPON2Q9BUD6 331 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 VN1R3Q9BXE9 311 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 NT5MQ9NPB1 228 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms