RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CYS1Q717R9 158 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 GPR141Q7Z602 305 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 FIBCD1Q8N539 461 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 OTUD5Q96G74 571 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 PNPLA3Q9NST1 481 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 SELENONQ9NZV5 590 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 HDAC3O15379 428 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 GJB1P08034 283 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 CCDC130P13994 396 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 CKMT2P17540 419 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 PFKPQ01813 784 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 BOLA3Q53S33 107 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 ZNF667Q5HYK9 610 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 CYP2R1Q6VVX0 501 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 AGAP3Q96P47 875 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 MAGED2Q9UNF1 606 aaPredicted RBP20.66■□□□□ 0.9
SHOX2-203ENST00000441443 SQORQ9Y6N5 450 aa20.66■□□□□ 0.9
SHOX2-203ENST00000441443 PSMD12O00232 456 aaPredicted RBP20.65■□□□□ 0.9
SHOX2-203ENST00000441443 GP5P40197 560 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 OAZ1P54368 228 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 RELAQ04206 551 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 ITGA7Q13683 1181 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 TGFBIQ15582 683 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 MOB2Q70IA6 237 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 SLC35B4Q969S0 331 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 NOL11Q9H8H0 719 aaKnown RBP20.65■□□□□ 0.9
SHOX2-203ENST00000441443 IGSF9Q9P2J2 1179 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 CNOT11Q9UKZ1 510 aaKnown RBP20.65■□□□□ 0.9
SHOX2-203ENST00000441443 A0A096LPK6 155 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 PIGNO95427 931 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 TFE3P19532 575 aaPredicted RBP20.65■□□□□ 0.9
SHOX2-203ENST00000441443 ATXN1P54253 815 aaKnown RBP20.65■□□□□ 0.9
SHOX2-203ENST00000441443 RNF169Q8NCN4 708 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 ARMC7Q9H6L4 198 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 ZDHHC2Q9UIJ5 367 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 ADAMTS5Q9UNA0 930 aa20.65■□□□□ 0.9
SHOX2-203ENST00000441443 TNNC2P02585 160 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 PGAM1P18669 254 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 STAT5BP51692 787 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 ARL13AQ5H913 290 aaPredicted RBP20.64■□□□□ 0.9
SHOX2-203ENST00000441443 GPR180Q86V85 440 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 TRAPPC12Q8WVT3 735 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 AGAP2Q99490 1192 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 LGMNQ99538 433 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 CLK4Q9HAZ1 481 aaKnown RBP20.64■□□□□ 0.9
SHOX2-203ENST00000441443 SLC38A7Q9NVC3 462 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 GPRC5DQ9NZD1 345 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 WDR37Q9Y2I8 494 aa20.64■□□□□ 0.9
SHOX2-203ENST00000441443 ADM5C9JUS6 153 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 TFEBP19484 476 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 GARSP41250 739 aaKnown RBP20.64■□□□□ 0.89
SHOX2-203ENST00000441443 RPL14P50914 215 aaKnown RBP20.64■□□□□ 0.89
SHOX2-203ENST00000441443 GSTM4Q03013 218 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 RALGDSQ12967 914 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 FSTL4Q6MZW2 842 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 OGFOD2Q6N063 350 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 XKR5Q6UX68 686 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 ACVR1CQ8NER5 493 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 PRDM16Q9HAZ2 1276 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 CENPFP49454 3210 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 GRID2O43424 1007 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 CBFA2T3O75081 653 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 ATE1O95260 518 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 POLR2AP24928 1970 aaKnown RBP20.64■□□□□ 0.89
SHOX2-203ENST00000441443 STRA8Q7Z7C7 330 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 COLGALT1Q8NBJ5 622 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 RSPH1Q8WYR4 309 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 PPWD1Q96BP3 646 aaKnown RBP20.64■□□□□ 0.89
SHOX2-203ENST00000441443 THAP11Q96EK4 314 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 TMEM176AQ96HP8 235 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 COX4I2Q96KJ9 171 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 ELP3Q9H9T3 547 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 TBC1D23Q9NUY8 699 aa20.64■□□□□ 0.89
SHOX2-203ENST00000441443 TCAF2A6NFQ2 919 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 KPNA7A9QM74 516 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 TMEM114B3SHH9 223 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 TK2O00142 265 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 OGTO15294 1046 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 HTRA2O43464 458 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-203ENST00000441443 SERPINB7O75635 380 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 SEC24DO94855 1032 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-203ENST00000441443 SAT1P21673 171 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 GK5Q6ZS86 529 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 HERC6Q8IVU3 1022 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 ZNF786Q8N393 782 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 CERS2Q96G23 380 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 FCRL3Q96P31 734 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-203ENST00000441443 NMRAL1Q9HBL8 299 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 ZBTB26Q9HCK0 441 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 CPSF3Q9UKF6 684 aaKnown RBP20.63■□□□□ 0.89
SHOX2-203ENST00000441443 KCNU1A8MYU2 1149 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 TRIM38O00635 465 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 USP2O75604 605 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-203ENST00000441443 DDNO94850 711 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-203ENST00000441443 GNAO1P09471 354 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 GRIA4P48058 902 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 ESRRGP62508 458 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 DPYSQ14117 519 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 ANKRD36BP1Q96IX9 119 aa20.63■□□□□ 0.89
SHOX2-203ENST00000441443 C12orf42Q96LP6 360 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms