RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 IFT172Q9UG01 1749 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 A8MX80 341 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 APOL3O95236 402 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 PSMG1O95456 288 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 STAU1O95793 577 aaKnown RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 PCSK2P16519 638 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 ITGALP20701 1170 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 CDK16Q00536 496 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 GCNT1Q02742 428 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 STILQ15468 1287 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 OCLNQ16625 522 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 ACOT1Q86TX2 421 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 UXS1Q8NBZ7 420 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 ZSWIM2Q8NEG5 633 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 FAM216AQ8WUB2 273 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 APOPT1Q96IL0 206 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 TEX13BQ9BXU2 312 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 COPS7BQ9H9Q2 264 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 FKBP14Q9NWM8 211 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 DDTLA6NHG4 134 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 CCDC154A6NI56 674 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 LGR5O75473 907 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 CCDC130P13994 396 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 CNTFP26441 200 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 RPL10AP62906 217 aaKnown RBP11.77□□□□□ -0.53
CCBE1-202ENST00000439986 CAMK2DQ13557 499 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 MTMR12Q9C0I1 747 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 ZNRF3Q9ULT6 936 aa11.77□□□□□ -0.53
CCBE1-202ENST00000439986 EVPLLA8MZ36 301 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 SNPHO15079 494 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 SUPT7LO94864 414 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 IL18RAPO95256 599 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 FGFR1P11362 822 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ATP5F1P24539 256 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 PCID2Q5JVF3 399 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 BNC2Q6ZN30 1099 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 C1orf186Q6ZWK4 172 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 PIH1D1Q9NWS0 290 aaKnown RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 DDIT4Q9NX09 232 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 PADI4Q9UM07 663 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 NR5A2O00482 541 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ZNF682O95780 498 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ODC1P11926 461 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 NPR2P20594 1047 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 TGM2P21980 687 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ALDH9A1P49189 494 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 HUNKP57058 714 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 C4orf22Q6V702 233 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ATG14Q6ZNE5 492 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 R3HCC1LQ7Z5L2 792 aaKnown RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CEP41Q9BYV8 373 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CLEC4MQ9H2X3 399 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 SOX13Q9UN79 622 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 PPIEQ9UNP9 301 aaKnown RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 DLG5Q8TDM6 1919 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CSDE1O75534 798 aaKnown RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 GJB6O95452 261 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 FYNP06241 537 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 NFICP08651 508 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 IST1P53990 364 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 SOX10P56693 466 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 DLG1Q12959 904 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CROCCP3Q8IVE0 287 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 SLC38A7Q9NVC3 462 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 NSMCE4AQ9NXX6 385 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 DAPK2Q9UIK4 370 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 MED16Q9Y2X0 877 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 TSPAN3O60637 253 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 MICAL2O94851 1124 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ERVK-10P10266 1014 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CSF2RAP15509 400 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 TTKP33981 857 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 HSPA13P48723 471 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CPT1AP50416 773 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 RIPK1Q13546 671 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 NPY5RQ15761 445 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 COMMD2Q86X83 199 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 DEFB107AQ8IZN7 70 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 GMCL1P1Q8NEA9 526 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 MAGEC3Q8TD91 643 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 FAM151AQ8WW52 585 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 DEPDC7Q96QD5 511 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ILKAPQ9H0C8 392 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 C8orf33Q9H7E9 229 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 MYOZ2Q9NPC6 264 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 CASTOR2A6NHX0 329 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 MEI4A8MW99 385 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 E9PBE3 544 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 TOMM70O94826 608 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 ICAM1P05362 532 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 TRAP1Q12931 704 aaKnown RBP11.76□□□□□ -0.53
CCBE1-202ENST00000439986 STARD3Q14849 445 aa11.76□□□□□ -0.53
CCBE1-202ENST00000439986 EML3Q32P44 896 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms