RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 LRRC34Q8IZ02 419 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SIX6OS1Q8N1H7 587 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 DEFB119Q8N690 84 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF366Q8N895 744 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 BPIFB1Q8TDL5 484 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 DENND1AQ8TEH3 1009 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 DYDC1Q8WWB3 177 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PRCCQ92733 491 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 INPP5DQ92835 1189 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 HAUS1Q96CS2 278 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 BTBD6Q96KE9 485 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 RAB3IPQ96QF0 476 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PRMT1Q99873 361 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ULBP1Q9BZM6 244 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SLC40A1Q9NP59 571 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 TXLNGQ9NUQ3 528 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 DUS2Q9NX74 493 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 RCOR3Q9P2K3 495 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF180Q9UJW8 692 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 NAALADL1Q9UQQ1 740 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 DMXL2Q8TDJ6 3036 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 TRAV19A0A0A6YYK7 116 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 E7ENQ6 273 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 NEDD8-MDP1E9PL57 170 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 KLF11O14901 512 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 BNIP3LO60238 219 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 TGDSO95455 350 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ASMTLO95671 621 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 F11P03951 625 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SRFP11831 508 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 KRT3P12035 628 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 NPR3P17342 541 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 KDELR1P24390 212 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 TARSP26639 723 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CDC25CP30307 473 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 AVPR2P30518 371 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ALDH3A1P30838 453 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 STX2P32856 288 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CHKAP35790 457 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 KCNJ1P48048 391 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 RASSF2P50749 326 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF143P52747 638 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SLC8A3P57103 927 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 GEMIN4P57678 1058 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 BOLA3Q53S33 107 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 TTC19Q6DKK2 380 aaPredicted RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PMF1Q6P1K2 205 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PKN3Q6P5Z2 889 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 LCLAT1Q6UWP7 414 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CHSY1Q86X52 802 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PARP9Q8IXQ6 854 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 FBXL6Q8N531 539 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 NAT8LQ8N9F0 302 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 MCUQ8NE86 351 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 FAF2Q96CS3 445 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 PIWIL1Q96J94 861 aaKnown RBP4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SMC6Q96SB8 1091 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SIKE1Q9BRV8 207 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CNPY3Q9BT09 278 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 VPS11Q9H270 941 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ACSS3Q9H6R3 686 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SAR1AQ9NR31 198 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 KLHL14Q9P2G3 628 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 CTNNAL1Q9UBT7 734 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 DUSP12Q9UNI6 340 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF148Q9UQR1 794 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 SH3BP1Q9Y3L3 701 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 RAD54BQ9Y620 910 aa4.88□□□□□ -1.63
EDEM3-203ENST00000439962 EXOC1LA0A1B0GW35 172 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TLDC2A0PJX2 215 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 BCLAF3A2AJT9 711 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF840PA6NDX5 716 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 YJEFN3A6XGL0 299 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 WASH3PC4AMC7 463 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TRAFD1O14545 582 aaPredicted RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CAPN9O14815 690 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MCF2LO15068 1137 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 NCAM1P13591 858 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PAX3P23760 479 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 FCARP24071 287 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PSMA2P25787 234 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CNTFP26441 200 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 SLC6A11P48066 632 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 IFNAR2P48551 515 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 NR2C2P49116 596 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 ARSEP51690 589 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF135P52742 658 aaPredicted RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CDK16Q00536 496 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 DNAJC3Q13217 504 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 NME3Q13232 169 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MAPRE1Q15691 268 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 HIF1AQ16665 826 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 KYNUQ16719 465 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CDO1Q16878 200 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CCDC38Q502W7 563 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CMPK2Q5EBM0 449 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 ARHGAP17Q68EM7 881 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 DENND1BQ6P3S1 775 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CYB5D1Q6P9G0 228 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms