RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MAN1C1Q9NR34 630 aa8.74□□□□□ -1.01
HPS4-206ENST00000439453 BCAP29Q9UHQ4 241 aa8.74□□□□□ -1.01
HPS4-206ENST00000439453 PCDHGC3Q9UN70 934 aa8.74□□□□□ -1.01
HPS4-206ENST00000439453 PCDHA11Q9Y5I1 949 aa8.74□□□□□ -1.01
HPS4-206ENST00000439453 STYXL1Q9Y6J8 313 aa8.74□□□□□ -1.01
HPS4-206ENST00000439453 NOP56O00567 594 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 TPP1O14773 563 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 TREHO43280 583 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 CAPNS1P04632 268 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 CYP2C9P11712 490 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 ZNF423Q2M1K9 1284 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 BNC2Q6ZN30 1099 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 LINC01465Q8N7H1 131 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 SEZ6LQ9BYH1 1024 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 OSBPL6Q9BZF3 934 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 POLR3FQ9H1D9 316 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 CISHQ9NSE2 258 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 USP18Q9UMW8 372 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PRUNE2Q8WUY3 3088 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 ZNF189O75820 626 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 CST3P01034 146 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 RALBP11234 206 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 CD1EP15812 388 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 MSX2P35548 267 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 MAGEA6P43360 314 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 ENTPD1P49961 510 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 CDH6P55285 790 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 KRT76Q01546 638 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 MBTPS1Q14703 1052 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 EPGNQ6UW88 154 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 NCCRP1Q6ZVX7 275 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 SERINC5Q86VE9 423 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 KYQ8NBH2 561 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 MCUQ8NE86 351 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 BHLHE22Q8NFJ8 381 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 ATP2A3Q93084 1043 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 KATNAL1Q9BW62 490 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 COG4Q9H9E3 785 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 DCDC2Q9UHG0 476 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 RNF11Q9Y3C5 154 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PRSS51A0A1B0GVH4 220 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 H0YCG3 227 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 XPO1O14980 1071 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 ASS1P00966 412 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 TIMP1P01033 207 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 ALDOAP04075 364 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 PRKCGP05129 697 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PORP16435 677 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 RBL1P28749 1068 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 SERPINB5P36952 375 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 TFDP2Q14188 446 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 SLC9B1Q4ZJI4 515 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PIGGQ5H8A4 983 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 FAM47CQ5HY64 1035 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PRPF38BQ5VTL8 546 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 CHERPQ8IWX8 916 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 DSELQ8IZU8 1212 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 MCPH1Q8NEM0 835 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 TRAPPC12Q8WVT3 735 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 RTP4Q96DX8 246 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 ZNF512Q96ME7 567 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 INIPQ9NRY2 104 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 SETD4Q9NVD3 440 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 CYTH4Q9UIA0 394 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 BARX2Q9UMQ3 279 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 KANSL1LA0AUZ9 987 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 XIRP2A4UGR9 3374 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 ZBED1O96006 694 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PDGFRBP09619 1106 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PIK3R1P27986 724 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 MAGEA3P43357 314 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PKNOX1P55347 436 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 YWHAEP62258 255 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 MS4A2Q01362 244 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PDAP1Q13442 181 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 C16orf72Q14CZ0 275 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 TARBP2Q15633 366 aaKnown RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 ZNF534Q76KX8 674 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 SNX32Q86XE0 403 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 TMEM102Q8N9M5 508 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.73□□□□□ -1.01
HPS4-206ENST00000439453 GIPC3Q8TF64 312 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 BADQ92934 168 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PEBP4Q96S96 227 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 MSTO1Q9BUK6 570 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 NUF2Q9BZD4 464 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 CDH19Q9H159 772 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 SMARCAD1Q9H4L7 1026 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PFDN4Q9NQP4 134 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.73□□□□□ -1.01
HPS4-206ENST00000439453 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 SLC17A6Q9P2U8 582 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 COPG2Q9UBF2 871 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 GABBR1Q9UBS5 961 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 VPS28Q9UK41 221 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 PCDHA10Q9Y5I2 948 aa8.73□□□□□ -1.01
HPS4-206ENST00000439453 CBFA2T3O75081 653 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 DGAT1O75907 488 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 ENDOD1O94919 500 aa8.72□□□□□ -1.01
HPS4-206ENST00000439453 NUP107P57740 925 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms