RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 BHMTQ93088 406 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 ACDQ96AP0 544 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 MSANTD3Q96H12 275 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 LGMNQ99538 433 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 TMEM121Q9BTD3 319 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 EBF3Q9H4W6 596 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 BRD9Q9H8M2 597 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 VPS28Q9UK41 221 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 TRHDEQ9UKU6 1024 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 SLC27A6Q9Y2P4 619 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 UTP11Q9Y3A2 253 aaKnown RBP13.72□□□□□ -0.21
RPE-208ENST00000436630 COL4A2P08572 1712 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 MIA3Q5JRA6 1907 aa13.72□□□□□ -0.21
RPE-208ENST00000436630 A0A0A0MRY4 1105 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 TARSL2A2RTX5 802 aaKnown RBP13.71□□□□□ -0.21
RPE-208ENST00000436630 C5orf60A6NFR6 353 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 ARNTLO00327 626 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 MATN3O15232 486 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 RAD51CO43502 376 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 MAFKO60675 156 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 MAP3K6O95382 1288 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 TUBBP07437 444 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.21
RPE-208ENST00000436630 VAV1P15498 845 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 RBL1P28749 1068 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 CSKP41240 450 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 PTGIRP43119 386 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 KCNJ1P48048 391 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 RENBPP51606 427 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 CLCN6P51797 869 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 LMAN2Q12907 356 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 HNRNPDQ14103 355 aaKnown RBP13.71□□□□□ -0.21
RPE-208ENST00000436630 TRIM68Q6AZZ1 485 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 ITPRIPL1Q6GPH6 555 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 RETSATQ6NUM9 610 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 SUGP1Q8IWZ8 645 aaKnown RBP13.71□□□□□ -0.21
RPE-208ENST00000436630 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 CSGALNACT1Q8TDX6 532 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 MAML1Q92585 1016 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 P2RY11Q96G91 374 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 ZFYVE19Q96K21 471 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 SPATA13Q96N96 652 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 FEM1AQ9BSK4 669 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 PLA2G2FQ9BZM2 168 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 FAM129AQ9BZQ8 928 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 USP29Q9HBJ7 922 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 PLK2Q9NYY3 685 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 PAK5Q9P286 719 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 GGA2Q9UJY4 613 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 FBXO10Q9UK96 956 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 OR51B4Q9Y5P0 310 aa13.71□□□□□ -0.21
RPE-208ENST00000436630 C5orf42Q9H799 3197 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 A0A0D9SEW6 157 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 RNF103O00237 685 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 TTI1O43156 1089 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 GCATO75600 419 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 NEBLO76041 1014 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 IFNB1P01574 187 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 SP100P23497 879 aaPredicted RBP13.7□□□□□ -0.22
RPE-208ENST00000436630 MCM3P25205 808 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 ACVRL1P37023 503 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
RPE-208ENST00000436630 DGKGP49619 791 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 PFKPQ01813 784 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 TNK2Q07912 1038 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 SLC20A2Q08357 652 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 EIF4HQ15056 248 aaKnown RBP13.7□□□□□ -0.22
RPE-208ENST00000436630 PLEKHG6Q3KR16 790 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 FSCBQ5H9T9 825 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 GRAMD4Q6IC98 578 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 NUDT18Q6ZVK8 323 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 KIAA0907Q7Z7F0 614 aaPredicted RBP13.7□□□□□ -0.22
RPE-208ENST00000436630 FAM71DQ8N9W8 422 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 BBOF1Q8ND07 529 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 OR7D4Q8NG98 312 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 LRRC45Q96CN5 670 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 LMLNQ96KR4 655 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 SPON2Q9BUD6 331 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 PDFQ9HBH1 243 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 ABCB8Q9NUT2 735 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 DNAJC17Q9NVM6 304 aaKnown RBP13.7□□□□□ -0.22
RPE-208ENST00000436630 DEC1Q9P2X7 70 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 UBA2Q9UBT2 640 aaPredicted RBP13.7□□□□□ -0.22
RPE-208ENST00000436630 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
RPE-208ENST00000436630 MYO18AQ92614 2054 aaKnown RBP13.69□□□□□ -0.22
RPE-208ENST00000436630 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.69□□□□□ -0.22
RPE-208ENST00000436630 LOC730098B7Z3J9 87 aa13.69□□□□□ -0.22
RPE-208ENST00000436630 TULP3O75386 442 aa13.69□□□□□ -0.22
RPE-208ENST00000436630 HEXIM1O94992 359 aaKnown RBP13.69□□□□□ -0.22
RPE-208ENST00000436630 KRT14P02533 472 aa13.69□□□□□ -0.22
RPE-208ENST00000436630 ASLP04424 464 aa13.69□□□□□ -0.22
RPE-208ENST00000436630 CCNB1P14635 433 aa13.69□□□□□ -0.22
RPE-208ENST00000436630 PTPN3P26045 913 aa13.69□□□□□ -0.22
RPE-208ENST00000436630 HLA-FP30511 346 aa13.69□□□□□ -0.22
RPE-208ENST00000436630 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
RPE-208ENST00000436630 INO80DQ53TQ3 878 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms