RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 PACSIN1Q9BY11 444 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 IRX2Q9BZI1 471 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 TRIM7Q9C029 511 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZYG11BQ9C0D3 744 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 ARRDC1-AS1Q9H2J1 176 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 DEF6Q9H4E7 631 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 NHEJ1Q9H9Q4 299 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRDM16Q9HAZ2 1276 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 MRPL47Q9HD33 250 aaKnown RBP5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 CD93Q9NPY3 652 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRSS16Q9NQE7 514 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 ABHD10Q9NUJ1 306 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 SPTLC3Q9NUV7 552 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 SUN2Q9UH99 717 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 FZD10Q9ULW2 581 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 CYP8B1Q9UNU6 501 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 F5P12259 2224 aa5.93□□□□□ -1.46
HMGB3P24-201ENST00000433260 A0A0D9SEW6 157 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 TMEM110-MUSTN1A8MSY1 372 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 K7ERQ8 282 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 CBX4O00257 560 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 DAPK3O43293 454 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SNAP91O60641 907 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MFAP3LO75121 409 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SIN3BO75182 1162 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MT-CO1P00395 513 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MYBL1P10243 752 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ACADMP11310 421 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 VAV1P15498 845 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 DESP17661 470 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 GLDCP23378 1020 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MAOBP27338 520 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 HOXA6P31267 233 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 HNRNPH3P31942 346 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 NNMTP40261 264 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 COPAP53621 1224 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 GSCP56915 257 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 WDR4P57081 412 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ECT2LQ008S8 904 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 CREB5Q02930 508 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF252P-AS1Q0IIN9 211 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 TBX2Q13207 712 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MTA1Q13330 715 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 TRIM14Q14142 442 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 LAPTM4AQ15012 233 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 EIF4HQ15056 248 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 CA9Q16790 459 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 PLK5Q496M5 336 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 C5orf22Q49AR2 442 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 PPP6R3Q5H9R7 873 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 KCNT1Q5JUK3 1230 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 C6orf118Q5T5N4 469 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ERMARDQ5T6L9 678 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 TTC39BQ5VTQ0 682 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 IL31Q6EBC2 164 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 CXorf57Q6NSI4 855 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SARM1Q6SZW1 724 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 LINGO4Q6UY18 593 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 CYP2U1Q7Z449 544 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF683Q8IZ20 524 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF557Q8N988 423 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SPC24Q8NBT2 197 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 NETO2Q8NC67 525 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 OR7D4Q8NG98 312 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 GANCQ8TET4 914 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 RUBCNQ92622 972 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRCCQ92733 491 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ALG14Q96F25 216 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 TRIM11Q96F44 468 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SIPA1Q96FS4 1042 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MRGPRX3Q96LB0 322 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MRGPRX1Q96LB2 322 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 PPP1R9BQ96SB3 815 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 DNAJC7Q99615 494 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 NUP85Q9BW27 656 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MKRN2Q9H000 416 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 OSBPL2Q9H1P3 480 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 DUSP15Q9H1R2 295 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 EPC1Q9H2F5 836 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 TMEM245Q9H330 911 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SEMA4AQ9H3S1 761 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SMOC1Q9H4F8 434 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 DHX35Q9H5Z1 703 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZWILCHQ9H900 591 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ITM2CQ9NQX7 267 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 NDFIP2Q9NV92 336 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 DNAAF2Q9NVR5 837 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 CTTNBP2NLQ9P2B4 639 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 MBD1Q9UIS9 605 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC25A13Q9UJS0 675 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 VPS28Q9UK41 221 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SMG5Q9UPR3 1016 aaKnown RBP5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 TBC1D30Q9Y2I9 924 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ACTL7AQ9Y615 435 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 SCINQ9Y6U3 715 aa5.92□□□□□ -1.46
HMGB3P24-201ENST00000433260 ADAMTS9Q9P2N4 1935 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 IGLV3-10A0A075B6K4 115 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 CCDC163A0A0D9SF12 145 aa5.91□□□□□ -1.46
HMGB3P24-201ENST00000433260 FAM187AA6NFU0 413 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms