RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 WDR91A4D1P6 747 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 COPEO14579 308 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 SEC24AO95486 1093 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 MT-CYBP00156 380 aaPredicted RBP19.95■□□□□ 0.78
VRK2-205ENST00000432057 CLTBP09497 229 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 CCNFP41002 786 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 DEFB103AP81534 67 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 FBXL22Q6P050 247 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 SPATA21Q7Z572 469 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 CIR1Q86X95 450 aaPredicted RBP19.95■□□□□ 0.78
VRK2-205ENST00000432057 UMODL1-AS1Q8N2C9 162 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 OTUD6BQ8N6M0 293 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 CDKL2Q92772 493 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 MTBPQ96DY7 904 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 CERS2Q96G23 380 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 FAM111AQ96PZ2 611 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 FCRL5Q96RD9 977 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 CLSTN3Q9BQT9 956 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 FNIP2Q9P278 1114 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 IPO11Q9UI26 975 aaKnown RBP19.95■□□□□ 0.78
VRK2-205ENST00000432057 USP15Q9Y4E8 981 aaPredicted RBP19.95■□□□□ 0.78
VRK2-205ENST00000432057 PSAT1Q9Y617 370 aa19.95■□□□□ 0.78
VRK2-205ENST00000432057 ATP9BO43861 1147 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 ERVK-10P10266 1014 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 TPH1P17752 444 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 MGAT5Q09328 741 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 NAPEPLDQ6IQ20 393 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 PACS1Q6VY07 963 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 CCDC121Q6ZUS5 278 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 CHSY1Q86X52 802 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 HMCESQ96FZ2 354 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 SLCO1B3Q9NPD5 702 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 RBM22Q9NW64 420 aaKnown RBP eCLIP19.94■□□□□ 0.78
VRK2-205ENST00000432057 PSMD3O43242 534 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 SOD2P04179 222 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 ETV4P43268 484 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 KCNQ1P51787 676 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 RING1Q06587 406 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 CDH17Q12864 832 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 NAB1Q13506 487 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 NADSYN1Q6IA69 706 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 CDHR3Q6ZTQ4 885 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 IPMKQ8NFU5 416 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 TOP1MTQ969P6 601 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 MYEOVQ96EZ4 313 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 ZNF333Q96JL9 665 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 SRPK1Q96SB4 655 aaKnown RBP19.94■□□□□ 0.78
VRK2-205ENST00000432057 TBL1YQ9BQ87 522 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 PITPNM3Q9BZ71 974 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 PCMTD2Q9NV79 361 aa19.94■□□□□ 0.78
VRK2-205ENST00000432057 AAR2Q9Y312 384 aaKnown RBP19.94■□□□□ 0.78
VRK2-205ENST00000432057 RFC2P35250 354 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 NPY2RP49146 381 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 TUFMP49411 452 aaKnown RBP19.93■□□□□ 0.78
VRK2-205ENST00000432057 NDST2P52849 883 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 SPRED3Q2MJR0 410 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 ZNF276Q8N554 614 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.93■□□□□ 0.78
VRK2-205ENST00000432057 ZNF75CPQ92670 426 aaPredicted RBP19.93■□□□□ 0.78
VRK2-205ENST00000432057 ZNF558Q96NG5 402 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 RPRD1AQ96P16 312 aaPredicted RBP19.93■□□□□ 0.78
VRK2-205ENST00000432057 ALG13Q9NP73 1137 aaKnown RBP19.93■□□□□ 0.78
VRK2-205ENST00000432057 ZFATQ9P243 1243 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 AFF4Q9UHB7 1163 aaKnown RBP19.93■□□□□ 0.78
VRK2-205ENST00000432057 PHTF1Q9UMS5 762 aa19.93■□□□□ 0.78
VRK2-205ENST00000432057 ANXA9O76027 345 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 USP1O94782 785 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 PEX11BO96011 259 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 DHRS4L1P0CG22 281 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 CNTFP26441 200 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 LRRC26Q2I0M4 334 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 ANO4Q32M45 955 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 ANKRD20A4Q4UJ75 823 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 LINC00523Q86TU6 105 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 TMEM135Q86UB9 458 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 LRRC49Q8IUZ0 686 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 SLC39A11Q8N1S5 342 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 ZNF689Q96CS4 500 aaPredicted RBP19.92■□□□□ 0.78
VRK2-205ENST00000432057 ZNF512Q96ME7 567 aaPredicted RBP19.92■□□□□ 0.78
VRK2-205ENST00000432057 FICDQ9BVA6 458 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 IL22Q9GZX6 179 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 IQCGQ9H095 443 aaKnown RBP19.92■□□□□ 0.78
VRK2-205ENST00000432057 RC3H2Q9HBD1 1191 aaKnown RBP19.92■□□□□ 0.78
VRK2-205ENST00000432057 ZNF212Q9UDV6 495 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 ZCWPW2A0A1B0GU75 182 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 CCT8L1PA6NM43 557 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 J3KR12 359 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 NEBLO76041 1014 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 GJB5O95377 273 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 ITGB8P26012 769 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 CCT6BQ92526 530 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 MFSD3Q96ES6 412 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 TMEM169Q96HH4 297 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 CHRAC1Q9NRG0 131 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 MKS1Q9NXB0 559 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 SOX13Q9UN79 622 aa19.92■□□□□ 0.78
VRK2-205ENST00000432057 HBS1LQ9Y450 684 aaKnown RBP19.92■□□□□ 0.78
VRK2-205ENST00000432057 FAM237BA0A1B0GVD1 139 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 DRGXA6NNA5 263 aa19.91■□□□□ 0.78
VRK2-205ENST00000432057 EDF1O60869 148 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms