RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CCNT1O60563 726 aaKnown RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 GFPT2O94808 682 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 GCP02774 474 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 WNT1P04628 370 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC3A2P08195 630 aaKnown RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 COX7A2P14406 83 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 HOXA7P31268 230 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 ABCD1P33897 745 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 HOXD13P35453 343 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 BSGP35613 385 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 PAFAH1B1P43034 410 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 EFNA5P52803 228 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 UFM1P61960 85 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 EFNB1P98172 346 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 GOLGA8FQ08AF8 430 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 ABHD18Q0P651 414 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 TDGQ13569 410 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 NAA25Q14CX7 972 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 AP5B1Q2VPB7 878 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 SLC9B1Q4ZJI4 515 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 TSTD2Q5T7W7 516 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 TBC1D9BQ66K14 1250 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 RBM44Q6ZP01 1051 aaKnown RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 CHSY1Q86X52 802 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 VPS52Q8N1B4 723 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 SCAIQ8N9R8 606 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 CAGE1Q8TC20 777 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 HDAC7Q8WUI4 952 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 CNOT9Q92600 299 aaKnown RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 NSUN4Q96CB9 384 aaKnown RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 CCDC17Q96LX7 622 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 HS6ST2Q96MM7 605 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 NEUROD6Q96NK8 337 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 FCRL5Q96RD9 977 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 ABHD14AQ9BUJ0 271 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 TM2D2Q9BX73 214 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 GLIS2Q9BZE0 524 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 FBXO40Q9UH90 709 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 GPR34Q9UPC5 381 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 CAMK2AQ9UQM7 478 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 HEMK1Q9Y5R4 338 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 MST1RQ04912 1400 aa3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 COL11A2P13942 1736 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P27-201ENST00000431429 A0A087X1B8 175 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 A0A1W2PQF6 199 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 CBY3A6NI87 242 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 AGAP14A8MT82 685 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMEM232C9JQI7 657 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 SYN3O14994 580 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 PROP1O75360 226 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 LATS1O95835 1130 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 DDAH2O95865 285 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ADAP00813 363 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 HLA-DQA2P01906 255 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ACADMP11310 421 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 CYP2A6P11509 494 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 AKR1A1P14550 325 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 GSTM2P28161 218 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 MLH1P40692 756 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 PTPN9P43378 593 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 HARS2P49590 506 aaKnown RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 CLK3P49761 638 aaKnown RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 BLKP51451 505 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 SETQ01105 290 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 PDE1CQ14123 709 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ANXA2RQ3ZCQ2 193 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM153CQ494X1 144 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 FBXO43Q4G163 708 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ITPRIPL1Q6GPH6 555 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMEM81Q6P7N7 255 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLC22A25Q6T423 547 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 BCAS4Q8TDM0 211 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMEM170AQ8WVE7 144 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ADAD1Q96M93 576 aaKnown RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 CADM1Q9BY67 442 aaKnown RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZNF341Q9BYN7 854 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 TRIM2Q9C040 744 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 KLK15Q9H2R5 256 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 RANBP17Q9H2T7 1088 aaKnown RBP3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ATP8A2Q9NTI2 1148 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARL15Q9NXU5 204 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLCO3A1Q9UIG8 710 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 MAFFQ9ULX9 164 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 ICKQ9UPZ9 632 aa3.4□□□□□ -1.87
HMGB1P27-201ENST00000431429 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 OR6C68A6NDL8 312 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 PABPN1LA6NDY0 278 aaKnown RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMEM247A6NEH6 219 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 UBE2Q2LH0YL09 131 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 HBP1O60381 514 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 GCATO75600 419 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 PLAUP00749 431 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 SERPINC1P01008 464 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 FCGR2AP12318 317 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 TACR2P21452 398 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 CLNS1AP54105 237 aaKnown RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 NAP1L1P55209 391 aaKnown RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 RPS3AP61247 264 aaKnown RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 RPL7AP62424 266 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms