RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 C16orf46Q6P387 395 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 MON1AQ86VX9 555 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 DCLK2Q8N568 766 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 ATPAF2Q8N5M1 289 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 RTL3Q8N8U3 475 aaKnown RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 URGCPQ8TCY9 931 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 FATE1Q969F0 183 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 GLT1D1Q96MS3 346 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 ZNF778Q96MU6 729 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 SERPINB11Q96P15 392 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 RAB3IPQ96QF0 476 aaPredicted RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 SIK2Q9H0K1 926 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 GLOD4Q9HC38 313 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 FBXO6Q9NRD1 293 aaPredicted RBP14.23□□□□□ -0.13
HOXC4-202ENST00000430889 SNX15Q9NRS6 342 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 ARL8BQ9NVJ2 186 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 THAP1Q9NVV9 213 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 TLR6Q9Y2C9 796 aa14.23□□□□□ -0.13
HOXC4-202ENST00000430889 CHD5Q8TDI0 1954 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 CCDC195A0A1B0GUA6 201 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 A0A1W2PQ45 241 aaPredicted RBP14.22□□□□□ -0.13
HOXC4-202ENST00000430889 A0A1W2PQY0 241 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 C2orf71A6NGG8 1288 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 E9PAM4 449 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 AOC2O75106 756 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 HAUS5O94927 633 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 PEX11BO96011 259 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 NEFHP12036 1026 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 PTPN4P29074 926 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 SPRP35270 261 aaPredicted RBP14.22□□□□□ -0.13
HOXC4-202ENST00000430889 SERPINB8P50452 374 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 NOGQ13253 232 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 STX3Q13277 289 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 PRPSAP1Q14558 356 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 NFE2Q16621 373 aaPredicted RBP14.22□□□□□ -0.13
HOXC4-202ENST00000430889 VARS2Q5ST30 1063 aaKnown RBP14.22□□□□□ -0.13
HOXC4-202ENST00000430889 WLSQ5T9L3 541 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 ATG14Q6ZNE5 492 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 LINC00523Q86TU6 105 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 NUP93Q8N1F7 819 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 DNAAF3Q8N9W5 541 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 PXYLP1Q8TE99 480 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 AGAP2Q99490 1192 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 APOL2Q9BQE5 337 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 TBC1D10AQ9BXI6 508 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 PRDM5Q9NQX1 630 aaPredicted RBP14.22□□□□□ -0.13
HOXC4-202ENST00000430889 CHRAC1Q9NRG0 131 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 ABI2Q9NYB9 513 aaPredicted RBP14.22□□□□□ -0.13
HOXC4-202ENST00000430889 BAIAP2L1Q9UHR4 511 aa14.22□□□□□ -0.13
HOXC4-202ENST00000430889 CAPN14A8MX76 684 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 DFFAO00273 331 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 NMBRP28336 390 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 MNAT1P51948 309 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 USP46P62068 366 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 PPM1JQ5JR12 505 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 FSTL4Q6MZW2 842 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 STRA8Q7Z7C7 330 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 TTC7BQ86TV6 843 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 KCNMB4Q86W47 210 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 LRRC49Q8IUZ0 686 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 SCN4BQ8IWT1 228 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 CNTN4Q8IWV2 1026 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 SPATA22Q8NHS9 363 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 USP33Q8TEY7 942 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 AZIN2Q96A70 460 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 MIPEPQ99797 713 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 TBL1YQ9BQ87 522 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 TUBB6Q9BUF5 446 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 FTHL17Q9BXU8 183 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 ELAC1Q9H777 363 aaKnown RBP14.21□□□□□ -0.13
HOXC4-202ENST00000430889 UBP1Q9NZI7 540 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 TMEM216Q9P0N5 145 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 NUDT5Q9UKK9 219 aa14.21□□□□□ -0.13
HOXC4-202ENST00000430889 AAR2Q9Y312 384 aaKnown RBP14.21□□□□□ -0.13
HOXC4-202ENST00000430889 IGLV3-10A0A075B6K4 115 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 FCHO1O14526 889 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ITM2AO43736 263 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ATP9BO43861 1147 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TBC1D4O60343 1298 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 VNN2O95498 520 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 HLA-DQB2P05538 268 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TPH1P17752 444 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 SLC8A1P32418 973 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 GMPRP36959 345 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 OR1G1P47890 313 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TUBP50607 506 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 RASSF2P50749 326 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 RPL10AP62906 217 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 PDE1BQ01064 536 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 SMAD1Q15797 465 aaKnown RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 HSP90AA5PQ58FG0 334 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 SDHAF4Q5VUM1 108 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ZCCHC23Q6ZST2 131 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 CMC1Q7Z7K0 106 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 ARID3BQ8IVW6 561 aaPredicted RBP14.2□□□□□ -0.14
HOXC4-202ENST00000430889 UMODL1-AS1Q8N2C9 162 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 TTC9BQ8N6N2 239 aa14.2□□□□□ -0.14
HOXC4-202ENST00000430889 CD99L2Q8TCZ2 262 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms