RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	FAM131C	Q96AQ9	280 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	PPP1R9B	Q96SB3	815 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	TBCB	Q99426	244 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	NEUROG2	Q9H2A3	272 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	TM9SF3	Q9HD45	589 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	SIK3	Q9Y2K2	1263 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	DAAM1	Q9Y4D1	1078 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	SNX11	Q9Y5W9	270 aa		18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	FLNB	O75369	2602 aa	Known RBP	18.23	■□□□□ 0.51
MRPL28-203	ENST00000429738	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	EIF4E1B	A6NMX2	242 aa	Known RBP	18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	EPHB6	O15197	1021 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	ATP9B	O43861	1147 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	VAV1	P15498	845 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	SLC8A1	P32418	973 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	GRIA4	P48058	902 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	NUMB	P49757	651 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	DEUP1	Q05D60	604 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	ZNF177	Q13360	481 aa	Predicted RBP	18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	ALF	Q53S48	1182 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	AADAT	Q8N5Z0	425 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	PDCD7	Q8N8D1	485 aa	Known RBP	18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	SLC20A1	Q8WUM9	679 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	CPA5	Q8WXQ8	436 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	C1orf74	Q96LT6	269 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	SIK2	Q9H0K1	926 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	ANKRD6	Q9Y2G4	727 aa		18.22	■□□□□ 0.51
MRPL28-203	ENST00000429738	SETX	Q7Z333	2677 aa	Known RBP	18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	IGLV3-10	A0A075B6K4	115 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738		A0A087WV48	116 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	DRGX	A6NNA5	263 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	CNTN5	O94779	1100 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	GFPT2	O94808	682 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	FSBP	O95073	299 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	ADH1B	P00325	375 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	CHRNB2	P17787	502 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	C5AR1	P21730	350 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	DRD3	P35462	400 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	SOX5	P35711	763 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	GRK6	P43250	576 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	PSMD8	P48556	350 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	POLR2F	P61218	127 aa	Known RBP	18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	FMO1	Q01740	532 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	CDR2	Q01850	454 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	SMAD1	Q15797	465 aa	Known RBP	18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	NAA35	Q5VZE5	725 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	NCEH1	Q6PIU2	408 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	MSANTD4	Q8NCY6	345 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	SPAG5	Q96R06	1193 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	EBF2	Q9HAK2	575 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	ANO10	Q9NW15	660 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	LIMA1	Q9UHB6	759 aa	Known RBP	18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738	PAXBP1	Q9Y5B6	917 aa		18.21	■□□□□ 0.51
MRPL28-203	ENST00000429738		A0A1W2PPC4	97 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	FAM170A	A1A519	330 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	FAM149A	A5PLN7	773 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	LRRC10B	A6NIK2	292 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	PCDHGA12	O60330	932 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	RNASEH2A	O75792	299 aa	Known RBP	18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	ENDOD1	O94919	500 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	ZNF18	P17022	549 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	GOT1	P17174	413 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	MMP8	P22894	467 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	COPB1	P53618	953 aa	Known RBP	18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	FKBP15	Q5T1M5	1219 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	SETD3	Q86TU7	594 aa	Predicted RBP	18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	SH2D3C	Q8N5H7	860 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	OR2T34	Q8NGX1	318 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	GANC	Q8TET4	914 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	PSMB7	Q99436	277 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	OMD	Q99983	421 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	TMPRSS4	Q9NRS4	437 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	SLC25A13	Q9UJS0	675 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	VPS28	Q9UK41	221 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	HS3ST2	Q9Y278	367 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	SNX10	Q9Y5X0	201 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	SHROOM3	Q8TF72	1996 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	BPTF	Q12830	3046 aa		18.2	■□□□□ 0.5
MRPL28-203	ENST00000429738	CHD5	Q8TDI0	1954 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	LRRC72	A6NJI9	287 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738		E9PAM4	449 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	GOLGA8S	H3BPF8	625 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	KCNK3	O14649	394 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	TPM2	P07951	284 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	ADPRH	P54922	357 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	RACK1	P63244	317 aa	Known RBP	18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	MYL5	Q02045	173 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	NCAPH	Q15003	741 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	STX1A	Q16623	288 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	SASS6	Q6UVJ0	657 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	APTX	Q7Z2E3	356 aa	Known RBP	18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	CFAP57	Q96MR6	1250 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	HAPLN3	Q96S86	360 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	HSD3B7	Q9H2F3	369 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	NLRC4	Q9NPP4	1024 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	ZNF212	Q9UDV6	495 aa		18.19	■□□□□ 0.5
MRPL28-203	ENST00000429738	DOCK9	Q9BZ29	2069 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms