RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SEC13P55735 322 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 COL4A3Q01955 1670 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 ODF2Q5BJF6 829 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 TMCO4Q5TGY1 634 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 PEX26Q7Z412 305 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 PCDH19Q8TAB3 1148 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 ATRIPQ8WXE1 791 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 NELL1Q92832 810 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 ISG20Q96AZ6 181 aaKnown RBP15.3■□□□□ 0.04
GARNL3-204ENST00000429629 RBM41Q96IZ5 413 aaKnown RBP15.3■□□□□ 0.04
GARNL3-204ENST00000429629 CALN1Q9BXU9 219 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 CD248Q9HCU0 757 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 ATP13A1Q9HD20 1204 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 VPS51Q9UID3 782 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 SLC25A13Q9UJS0 675 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 HYOU1Q9Y4L1 999 aa15.3■□□□□ 0.04
GARNL3-204ENST00000429629 ZDBF2Q9HCK1 2354 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 A0A1W2PQF6 199 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 ALDH1A2O94788 518 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 CD48P09326 243 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 PTPN7P35236 360 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 CETN2P41208 172 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 IL12RB1P42701 662 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 CDKN2BP42772 138 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 RWDD2BP57060 319 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 CAMK2GQ13555 558 aaPredicted RBP15.29■□□□□ 0.04
GARNL3-204ENST00000429629 TFDP2Q14188 446 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 STARD3Q14849 445 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 PPP2R5EQ16537 467 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 HNRNPA1L2Q32P51 320 aaKnown RBP15.29■□□□□ 0.04
GARNL3-204ENST00000429629 ZFYVE27Q5T4F4 411 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 SLC9A4Q6AI14 798 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 IL31Q6EBC2 164 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 PKN3Q6P5Z2 889 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 SERPINA13PQ6UXR4 307 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 BZW1Q7L1Q6 419 aaKnown RBP15.29■□□□□ 0.04
GARNL3-204ENST00000429629 ARHGAP12Q8IWW6 846 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 REXO1L1PQ8IX06 675 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 MAML2Q8IZL2 1156 aaPredicted RBP15.29■□□□□ 0.04
GARNL3-204ENST00000429629 SH2D3CQ8N5H7 860 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 UBL4BQ8N7F7 174 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 OR7D4Q8NG98 312 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 SORCS1Q8WY21 1168 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 FATE1Q969F0 183 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 HES6Q96HZ4 224 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 ZNF830Q96NB3 372 aaPredicted RBP15.29■□□□□ 0.04
GARNL3-204ENST00000429629 ZNF599Q96NL3 588 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 ACOX2Q99424 681 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 SPON2Q9BUD6 331 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
GARNL3-204ENST00000429629 CEP44Q9C0F1 390 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 POLMQ9NP87 494 aaPredicted RBP15.29■□□□□ 0.04
GARNL3-204ENST00000429629 KCND1Q9NSA2 647 aa15.29■□□□□ 0.04
GARNL3-204ENST00000429629 K7ESF4 209 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 ZBTB24O43167 697 aaPredicted RBP15.28■□□□□ 0.04
GARNL3-204ENST00000429629 SYNCRIPO60506 623 aaKnown RBP15.28■□□□□ 0.04
GARNL3-204ENST00000429629 APBB3O95704 486 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 KRT1P04264 644 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 TDGF1P13385 188 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 HOXB2P14652 356 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 ACVRL1P37023 503 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 NR2C2P49116 596 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 ZNF33AQ06730 810 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 MMRN1Q13201 1228 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 RFTN1Q14699 578 aaPredicted RBP15.28■□□□□ 0.04
GARNL3-204ENST00000429629 FNDC3BQ53EP0 1204 aaKnown RBP15.28■□□□□ 0.04
GARNL3-204ENST00000429629 TFDP3Q5H9I0 405 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 RASSF3Q86WH2 238 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 CCDC33Q8N5R6 958 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 PQLC3Q8N755 202 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 FRS2Q8WU20 508 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 CYB5D2Q8WUJ1 264 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 HMCESQ96FZ2 354 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 TSGA13Q96PP4 275 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 SLC39A8Q9C0K1 460 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 BRD8Q9H0E9 1235 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 GOLPH3Q9H4A6 298 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 LZTFL1Q9NQ48 299 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 CACNA2D2Q9NY47 1150 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 SLCO3A1Q9UIG8 710 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 ARIH1Q9Y4X5 557 aaPredicted RBP15.28■□□□□ 0.04
GARNL3-204ENST00000429629 CAPN6Q9Y6Q1 641 aa15.28■□□□□ 0.04
GARNL3-204ENST00000429629 EDDM13A0A1B0GTR0 161 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 ANTXRLA6NF34 631 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 CBX4O00257 560 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 SNAP91O60641 907 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 PRAMEF11O60813 436 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 CD160O95971 181 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 MX2P20592 715 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 GJC1P36383 396 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 CTSOP43234 321 aaPredicted RBP15.27■□□□□ 0.04
GARNL3-204ENST00000429629 SERPINH1P50454 418 aaKnown RBP15.27■□□□□ 0.04
GARNL3-204ENST00000429629 PAPOLAP51003 745 aaKnown RBP15.27■□□□□ 0.04
GARNL3-204ENST00000429629 ARF5P84085 180 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 SATB1Q01826 763 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 ZBTB16Q05516 673 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 MFSD7Q6UXD7 560 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 TMEM92Q6UXU6 159 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms