RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 FAM86B2P0C5J1 330 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 HSMCR30P0CW71 290 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 CHKAP35790 457 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 XRCC4Q13426 336 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FNDC3BQ53EP0 1204 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 VN1R5Q7Z5H4 357 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 EXOC3L1Q86VI1 746 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 DHRSXQ8N5I4 330 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ZNF513Q8N8E2 541 aaPredicted RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 ITFG1Q8TB96 612 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ACMSDQ8TDX5 336 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 SENP8Q96LD8 212 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 SPRTNQ9H040 489 aaPredicted RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 MYRFQ9Y2G1 1151 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 DDX3XO00571 662 aaKnown RBP eCLIP12.99□□□□□ -0.33
LDB3-205ENST00000429277 PDE9AO76083 593 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 MLYCDO95822 493 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 KDELR1P24390 212 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ACAT1P24752 427 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 SLC39A12Q504Y0 691 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 PDZK1Q5T2W1 519 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ZNF605Q86T29 641 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FUCA2Q9BTY2 467 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 TRIT1Q9H3H1 467 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 CYP7B1O75881 506 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 AKAP5P24588 427 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 SMIM11AP58511 58 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 DGUOKQ16854 277 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 RSBN1Q5VWQ0 802 aaPredicted RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 PLEKHA7Q6IQ23 1121 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 CCDC33Q8N5R6 958 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 CAMKK1Q8N5S9 505 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 AHCYL2Q96HN2 611 aaKnown RBP12.99□□□□□ -0.33
LDB3-205ENST00000429277 APBA2Q99767 749 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ARL15Q9NXU5 204 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 ZNF232Q9UNY5 417 aa12.99□□□□□ -0.33
LDB3-205ENST00000429277 A0A087WXM4 84 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 OR6A2O95222 327 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 LGALS2P05162 132 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ST3GAL1Q11201 340 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ZNHIT3Q15649 155 aaPredicted RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 CBWD6Q4V339 395 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 WDR59Q6PJI9 974 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 LPCAT2Q7L5N7 544 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 DPF3Q92784 378 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 MKL1Q969V6 931 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 KAZALD1Q96I82 304 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 REEP1Q9H902 201 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 GAKO14976 1311 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 KPNA4O00629 521 aaPredicted RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 KCNH1O95259 989 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 TPH1P17752 444 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 TTPAP49638 278 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 PPP1R15BQ5SWA1 713 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 KRT77Q7Z794 578 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 OR6Y1Q8NGX8 325 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 SEPHS2Q99611 448 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ULBP1Q9BZM6 244 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ROGDIQ9GZN7 287 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ETNK2Q9NVF9 386 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 URADA6NGE7 173 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 PHGDHO43175 533 aaKnown RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 ATP6V1G2O95670 118 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ABHD2P08910 425 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 PTPN1P18031 435 aaKnown RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 WEE1P30291 646 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 COPZ1P61923 177 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 SPIDRQ14159 915 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 AFTPHQ6ULP2 937 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 SH3BP5LQ7L8J4 393 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 RPS6KA6Q9UK32 745 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 TDRKHQ9Y2W6 561 aaKnown RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 PCDHGC5Q9Y5F6 944 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 DIP2BQ9P265 1576 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 TRAV19A0A0A6YYK7 116 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 BTNL10A8MVZ5 291 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 C1QTNF3-AMACRE9PGA6 284 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 KPNA3O00505 521 aaPredicted RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 TNFRSF8P28908 595 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 THOP1P52888 689 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ALG11Q2TAA5 492 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 SCUBE3Q8IX30 993 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 ZCCHC7Q8N3Z6 543 aaKnown RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 ZNF75CPQ92670 426 aaPredicted RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 CENPIQ92674 756 aaPredicted RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 IL17RBQ9NRM6 502 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 MRPL17Q9NRX2 175 aaKnown RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
LDB3-205ENST00000429277 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
LDB3-205ENST00000429277 AK9Q5TCS8 1911 aa12.97□□□□□ -0.33
LDB3-205ENST00000429277 MYPNQ86TC9 1320 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms