RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 OR6K2Q8NGY2 324 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 GSDMBQ8TAX9 411 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 UCMAQ8WVF2 138 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 WDR60Q8WVS4 1066 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 MTG1Q9BT17 334 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 THTPAQ9BU02 230 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 MLPHQ9BV36 600 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 GPR62Q9BZJ7 368 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 DNAI2Q9GZS0 605 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 PLK2Q9NYY3 685 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 CRYL1Q9Y2S2 319 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 STARD13Q9Y3M8 1113 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 SDR42E2A6NKP2 422 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ZNF487B1APH4 448 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 B2RBV5 119 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 TROVE2P10155 538 aaKnown RBP eCLIP8.54□□□□□ -1.04
CD44-208ENST00000428726 HAPLN1P10915 354 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 AXLP30530 894 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 YWHAHQ04917 246 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 DUSP4Q13115 394 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 CBLBQ13191 982 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 GALNTL6Q49A17 601 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 KHDC1Q4VXA5 237 aaKnown RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 RALGPS1Q5JS13 557 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 CAPRIN2Q6IMN6 1127 aaKnown RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 RSPO2Q6UXX9 243 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 PACS1Q6VY07 963 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 C16orf59Q7L2K0 433 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 CLNKQ7Z7G1 428 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 DBF4BQ8NFT6 615 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 OR6P1Q8NGX9 317 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ESAMQ96AP7 390 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 RTP4Q96DX8 246 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 APOPT1Q96IL0 206 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 FAM161BQ96MY7 647 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 TTC1Q99614 292 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 SLC39A8Q9C0K1 460 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 DENND2DQ9H6A0 471 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 KCNK13Q9HB14 408 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 GKN1Q9NS71 199 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 GMIPQ9P107 970 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 USH1CQ9Y6N9 552 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 BCLAF3A2AJT9 711 aaKnown RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 CFLARO15519 480 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ADAM12O43184 909 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 XPOTO43592 962 aaKnown RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 KRT36O76013 467 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 UNC5CO95185 931 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ITGA2BP08514 1039 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 ESRRAP11474 423 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 HNRNPLP14866 589 aaKnown RBP eCLIP8.54□□□□□ -1.04
CD44-208ENST00000428726 KCNQ1P51787 676 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 MFSD14CQ5VZR4 134 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 C4orf22Q6V702 233 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 NAPRTQ6XQN6 538 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 RIPOR1Q6ZS17 1223 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 KCTD4Q8WVF5 259 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 MYLIPQ8WY64 445 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 SLC7A6OSQ96CW6 309 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 PHF21BQ96EK2 531 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 GORASP1Q9BQQ3 440 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 CCSER2Q9H7U1 834 aa8.54□□□□□ -1.04
CD44-208ENST00000428726 PRDM5Q9NQX1 630 aaPredicted RBP8.54□□□□□ -1.04
CD44-208ENST00000428726 RBM22Q9NW64 420 aaKnown RBP eCLIP8.54□□□□□ -1.04
CD44-208ENST00000428726 ATP6AP2A0A1C7CYW4 349 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 HAS3O00219 553 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 GYG2O15488 501 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 ATP6AP2O75787 350 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 HAUS5O94927 633 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 C1QAP02745 245 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 GNAT1P11488 350 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 GLDCP23378 1020 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 ALDH3A1P30838 453 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 SERPINB5P36952 375 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 SCNN1AP37088 669 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 PTPN9P43378 593 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 CCDC15Q0P6D6 951 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 PDCD2Q16342 344 aaPredicted RBP8.53□□□□□ -1.04
CD44-208ENST00000428726 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 FSTL4Q6MZW2 842 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 ARCQ7LC44 396 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 MCUR1Q96AQ8 359 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 QKIQ96PU8 341 aaKnown RBP eCLIP8.53□□□□□ -1.04
CD44-208ENST00000428726 FAM193BQ96PV7 902 aaPredicted RBP8.53□□□□□ -1.04
CD44-208ENST00000428726 TSPAN18Q96SJ8 248 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 NACA2Q9H009 215 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 CYLDQ9NQC7 956 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 PLLPQ9Y342 182 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 USP3Q9Y6I4 520 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 CHD9Q3L8U1 2897 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 AXIN1O15169 862 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 TM9SF1O15321 606 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 DUSP11O75319 330 aaKnown RBP8.53□□□□□ -1.04
CD44-208ENST00000428726 TOMM70O94826 608 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 JUNP05412 331 aaKnown RBP8.53□□□□□ -1.04
CD44-208ENST00000428726 ZCCHC18P0CG32 403 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 KCNE1P15382 129 aa8.53□□□□□ -1.04
CD44-208ENST00000428726 ZFXP17010 805 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms