RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 HDAC11Q96DB2 347 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 RUNDC3BQ96NL0 473 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 FEM1AQ9BSK4 669 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 TMEM121Q9BTD3 319 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 CIPCQ9C0C6 399 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 BRD8Q9H0E9 1235 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 UBA2Q9UBT2 640 aaPredicted RBP8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 VPS51Q9UID3 782 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 TTLL3Q9Y4R7 772 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 PIAS3Q9Y6X2 628 aa8.09□□□□□ -1.11
HMGA1P4-201ENST00000428643 REV3LO60673 3130 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 CFAP69A5D8W1 941 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZSCAN5CA6NGD5 496 aaPredicted RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 J3KR12 359 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 RIOK3O14730 519 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 TRIM24O15164 1050 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 MTSS1O43312 755 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 NARSO43776 548 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 PRAMEF11O60813 436 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 ITGAVP06756 1048 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 SRFP11831 508 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 VAV1P15498 845 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 POLR2EP19388 210 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 GLDCP23378 1020 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 RBL1P28749 1068 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 CTHP32929 405 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 GJA4P35212 333 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC6A11P48066 632 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 VPS41P49754 854 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 GEMIN4P57678 1058 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 LMNB2Q03252 620 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC12A1Q13621 1099 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 DMC1Q14565 340 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF235Q14590 738 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 PPP1R7Q15435 360 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 OASLQ15646 514 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 GAB4Q2WGN9 574 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 TEX35Q5T0J7 233 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 TMCO4Q5TGY1 634 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 MBLAC2Q68D91 279 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 NAIF1Q69YI7 327 aaPredicted RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 ASTLQ6HA08 431 aaPredicted RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 CCDC70Q6NSX1 233 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 RETSATQ6NUM9 610 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 DRICH1Q6PGQ1 229 aaPredicted RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 LINGO4Q6UY18 593 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 LRRC49Q8IUZ0 686 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 APCDD1Q8J025 514 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 NOA1Q8NC60 698 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 WFIKKN2Q8TEU8 576 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 USP33Q8TEY7 942 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 ATXN2LQ8WWM7 1075 aaKnown RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 HTR3CQ8WXA8 447 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 TSGA13Q96PP4 275 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 ACE2Q9BYF1 805 aaPredicted RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 CEP41Q9BYV8 373 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 HEBP1Q9NRV9 189 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 KLHL8Q9P2G9 620 aaPredicted RBP8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 AMACRQ9UHK6 382 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 OR51B4Q9Y5P0 310 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 DOCK6Q96HP0 2047 aa8.08□□□□□ -1.12
HMGA1P4-201ENST00000428643 A0A0A0MRY4 1105 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 BCLAF3A2AJT9 711 aaKnown RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 TBC1D3BA6NDS4 549 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 SPECC1L-ADORA2AF8WAN1 911 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 MATN3O15232 486 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 TTI1O43156 1089 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 KDELR3O43731 214 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 MAFKO60675 156 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 KAT7O95251 611 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 APODP05090 189 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 CCNCP24863 283 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ACTN2P35609 894 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 OPRD1P41143 372 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 EIF2DP41214 584 aaKnown RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 CTSOP43234 321 aaPredicted RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 MMP13P45452 471 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 NRLP54845 237 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 GDF10P55107 478 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 IFI35P80217 286 aaPredicted RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 MRPS25P82663 173 aaKnown RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ARF5P84085 180 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF33AQ06730 810 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 IL10RBQ08334 325 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZBTB17Q13105 803 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 DHX34Q14147 1143 aaKnown RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 KCTD19Q17RG1 926 aaPredicted RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 GEN1Q17RS7 908 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 PREPLQ4J6C6 727 aaPredicted RBP8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ARHGEF18Q6ZSZ5 1173 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ADIPOR2Q86V24 386 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 JAMLQ86YT9 394 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 BBS5Q8N3I7 341 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ALLCQ8N6M5 410 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 TERB1Q8NA31 727 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 ATL2Q8NHH9 583 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 CCDC26Q8TAB7 109 aa8.07□□□□□ -1.12
HMGA1P4-201ENST00000428643 CCDC110Q8TBZ0 833 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms