RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PARP15Q460N3 678 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 BOLA3Q53S33 107 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 EFHC2Q5JST6 749 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 E4F1Q66K89 784 aaPredicted RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 CYP2U1Q7Z449 544 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 FAM131BQ86XD5 332 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 LRRC49Q8IUZ0 686 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 CNGA4Q8IV77 575 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 UMODL1-AS1Q8N2C9 162 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 PGBD3Q8N328 593 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 LZTR1Q8N653 840 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 PCDH20Q8N6Y1 951 aaKnown RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 TMIEQ8NEW7 156 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 JOSD2Q8TAC2 188 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 TEKT4Q8WW24 435 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 PTPRN2Q92932 1015 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 TBC1D31Q96DN5 1066 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 MYEOVQ96EZ4 313 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 HINFPQ9BQA5 517 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 TPSD1Q9BZJ3 242 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 BTBD1Q9H0C5 482 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 PABPC3Q9H361 631 aaKnown RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 CAPN10Q9HC96 672 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 PARD6AQ9NPB6 346 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 ANLNQ9NQW6 1124 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 IFNKQ9P0W0 207 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 STIM2Q9P246 746 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 RCOR3Q9P2K3 495 aaPredicted RBP9.37□□□□□ -0.91
SMC1A-203ENST00000428014 UVRAGQ9P2Y5 699 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 INTUQ9ULD6 942 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 NCKAP1Q9Y2A7 1128 aa9.37□□□□□ -0.91
SMC1A-203ENST00000428014 DMXL1Q9Y485 3027 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 C1QTNF3-AMACRE9PGA6 284 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 C3orf80F5H4A9 247 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 TM4SF5O14894 197 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 DFNA5O60443 496 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 RNGTTO60942 597 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 NDUFS2O75306 463 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ZMPSTE24O75844 475 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 LRIG2O94898 1065 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 PRNPP04156 253 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 CYP1A2P05177 515 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 RHOCP08134 193 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 PLEKP08567 350 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 TFE3P19532 575 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 BCKDHBP21953 392 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ID4P47928 161 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 PXNP49023 591 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 CCR5P51681 352 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 SUOXP51687 545 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 NDST2P52849 883 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 RPS14P62263 151 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 RPL7AP62424 266 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ATP11AP98196 1134 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 RPL6Q02878 288 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 GNA12Q03113 381 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 OVGP1Q12889 678 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 SRSF5Q13243 272 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 GRM3Q14832 879 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 CST6Q15828 149 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 SLC18A3Q16572 532 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ASTE1Q2TB18 679 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ALFQ53S48 1182 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ALKBH5Q6P6C2 394 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 IL27RAQ6UWB1 636 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 TMC6Q7Z403 805 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 VSTM4Q8IW00 320 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 CFAP52Q8N1V2 620 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 EMC1Q8N766 993 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 RTL3Q8N8U3 475 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 C12orf50Q8NA57 414 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 FAM71BQ8TC56 605 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 HCAR2Q8TDS4 363 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 UBE2Q2Q8WVN8 375 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 OR8D1Q8WZ84 308 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 MCEEQ96PE7 176 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 FAM129BQ96TA1 746 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 NUSAP1Q9BXS6 441 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 XPO4Q9C0E2 1151 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 SIK2Q9H0K1 926 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ARRDC1-AS1Q9H2J1 176 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 VPS28Q9UK41 221 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 CDV3Q9UKY7 258 aaKnown RBP9.36□□□□□ -0.91
SMC1A-203ENST00000428014 PPM1HQ9ULR3 514 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 FZD10Q9ULW2 581 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 SLC6A14Q9UN76 642 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 VPS9D1Q9Y2B5 631 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
SMC1A-203ENST00000428014 CEP192Q8TEP8 1941 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 CABIN1Q9Y6J0 2220 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 A0A1B0GTW7 788 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 ANTXRLA6NF34 631 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 LRRC72A6NJI9 287 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 ZNF487B1APH4 448 aa9.35□□□□□ -0.91
SMC1A-203ENST00000428014 CCP110O43303 1012 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms