RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 NEU2Q9Y3R4 380 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 PCDHB3Q9Y5E6 796 aa5.83□□□□□ -1.48
HERC4-206ENST00000427635 CD3EAPO15446 510 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 RGS5O15539 181 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 SCN2BO60939 215 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 CAMTA2O94983 1202 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 GJB1P08034 283 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 TPBGLP0DKB5 382 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 PDHBP11177 359 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 PIM1P11309 404 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 MTHFD1P11586 935 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 ATP6V1B1P15313 513 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 NUMBP49757 651 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 DMWDQ09019 674 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 RASA2Q15283 850 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 NDUFAF6Q330K2 333 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 POM121L1PQ3SYA9 428 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 GPAT3Q53EU6 434 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 DET1Q7L5Y6 550 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 RBM12BQ8IXT5 1001 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 MTMR14Q8NCE2 650 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 RP9Q8TA86 221 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 ATL1Q8WXF7 558 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ZHX1-C8orf76Q96EF9 292 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 TMEM176AQ96HP8 235 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 SLC38A3Q99624 504 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 NECTIN3Q9NQS3 549 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ARL15Q9NXU5 204 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.82□□□□□ -1.48
HERC4-206ENST00000427635 SLC12A4Q9UP95 1085 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ZCCHC11Q5TAX3 1644 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 PNPLA6Q8IY17 1366 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 XPO1O14980 1071 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 CNOT3O75175 753 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 CATP04040 527 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 NDUFV2P19404 249 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 UBA1P22314 1058 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 DGKAP23743 735 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 VAMP1P23763 118 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ALDH5A1P51649 535 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 OAZ1P54368 228 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 PSMD5Q16401 504 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 HSDL2Q6YN16 418 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 TFAP2DQ7Z6R9 452 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 STX12Q86Y82 276 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ARHGEF19Q8IW93 802 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 CNDP1Q96KN2 507 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 HIST1H2AAQ96QV6 131 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 HDHD2Q9H0R4 259 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 KLHL1Q9NR64 748 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 PHPT1Q9NRX4 125 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 ABHD10Q9NUJ1 306 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 COPS7AQ9UBW8 275 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 TIMM13Q9Y5L4 95 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 CENPXA8MT69 81 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 A8MX80 341 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 MEIS2O14770 477 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 GRM6O15303 877 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 TMCC2O75069 709 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 INSRRP14616 1297 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ITIH2P19823 946 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 RPL4P36578 427 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 AVPR1BP47901 424 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ACTR3P61158 418 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 KDSRQ06136 332 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 MTAPQ13126 283 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 CBX2Q14781 532 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 DUS1LQ6P1R4 473 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 UNC5DQ6UXZ4 953 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ZDHHC17Q8IUH5 632 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ADSSL1Q8N142 457 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 C19orf18Q8NEA5 215 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 SLC35G2Q8TBE7 412 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ATP8B4Q8TF62 1192 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 FAM120BQ96EK7 910 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.82□□□□□ -1.48
HERC4-206ENST00000427635 LMBRD1Q9NUN5 540 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 EDARQ9UNE0 448 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 IRS2Q9Y4H2 1338 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 GSG1L2A8MUP6 293 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 KMOO15229 486 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ATP8B1O43520 1251 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 BLKP51451 505 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 SIM2Q14190 667 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 WDR45BQ5MNZ6 344 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 SLC30A9Q6PML9 568 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 TMEM132CQ8N3T6 1108 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 FAM71DQ8N9W8 422 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 FAM98AQ8NCA5 519 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 FAM172AQ8WUF8 416 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 MYOCQ99972 504 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 USB1Q9BQ65 265 aaKnown RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 VIPAS39Q9H9C1 493 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ADPRHL2Q9NX46 363 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 ZMYND8Q9ULU4 1186 aaPredicted RBP5.82□□□□□ -1.48
HERC4-206ENST00000427635 PCDHGB5Q9Y5G0 923 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 NRCAMQ92823 1304 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 LAMC1P11047 1609 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 WASHC1A8K0Z3 465 aa5.82□□□□□ -1.48
HERC4-206ENST00000427635 WASH3PC4AMC7 463 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms