RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 EPB41L2O43491 1005 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 UGDHO60701 494 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 GUCY1B2O75343 617 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 SGPL1O95470 568 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 NTN1O95631 604 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 HOXB9P17482 250 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ITGB6P18564 788 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 TFEBP19484 476 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 TYK2P29597 1187 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 PSMC2P35998 433 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 STAT1P42224 750 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 PAFAH1B1P43034 410 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 CPA2P48052 419 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 SOX2P48431 317 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 TUBP50607 506 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 CCT4P50991 539 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 CYP2J2P51589 502 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 MVDP53602 400 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 VAMP2P63027 116 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 RPP30P78346 268 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 HSF1Q00613 529 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 CFHR1Q03591 330 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 G3BP1Q13283 466 aaKnown RBP eCLIP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 FHL1Q13642 323 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 NAA25Q14CX7 972 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 AP5B1Q2VPB7 878 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 WDR45BQ5MNZ6 344 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 SH2D4BQ5SQS7 431 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 INTS11Q5TA45 600 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 FAM171A1Q5VUB5 890 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 DENND1BQ6P3S1 775 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 SLC22A25Q6T423 547 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF793Q6ZN11 406 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 LRRC8DQ7L1W4 858 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 MDGA2Q7Z553 956 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 GALNT7Q86SF2 657 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ADGRG6Q86SQ4 1221 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 CCDC25Q86WR0 208 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 GHDCQ8N2G8 530 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 PAQR4Q8N4S7 273 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ARL14EPQ8N8R7 260 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 TEX19Q8NA77 164 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF548Q8NEK5 533 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 IL17REQ8NFR9 667 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 C16orf52Q8NHV5 167 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 FAM110DQ8TAY7 271 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 C2CD4CQ8TF44 421 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 NCSTNQ92542 709 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 COQ8BQ96D53 544 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 RRP36Q96EU6 259 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 HMCESQ96FZ2 354 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 MASTLQ96GX5 879 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ZNF419Q96HQ0 510 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 MPP4Q96JB8 637 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 SIGLEC11Q96RL6 698 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 NPAS1Q99742 590 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 FOXP1Q9H334 677 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ZHX3Q9H4I2 956 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 TTC12Q9H892 705 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 VEZTQ9HBM0 779 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 MOV10Q9HCE1 1003 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 UPB1Q9UBR1 384 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 CNOT7Q9UIV1 285 aaKnown RBP2.66□□□□□ -1.98
PTPRC-208ENST00000427110 ANAPC4Q9UJX5 808 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 TBX20Q9UMR3 447 aa2.66□□□□□ -1.98
PTPRC-208ENST00000427110 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 C2CD4BA6NLJ0 364 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 KRTAP29-1A8MX34 341 aaPredicted RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 F8W810 466 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 J3KRW8 73 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 RHODO00212 210 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 SOCS2O14508 198 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 DHX16O60231 1041 aaKnown RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 HLA-DQA2P01906 255 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 FGBP02675 491 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 FCGR2AP12318 317 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 ARSAP15289 507 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 KLRC2P26717 231 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 AVPR2P30518 371 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 HNF1BP35680 557 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 GGT5P36269 586 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 SKIV2L2P42285 1042 aaKnown RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 PLCD1P51178 756 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 LINC00205P59089 165 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 RPS13P62277 151 aaKnown RBP2.65□□□□□ -1.99
PTPRC-208ENST00000427110 RHAGQ02094 409 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 ZBTB16Q05516 673 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 GALNT2Q10471 571 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 C5orf22Q49AR2 442 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 ALG10Q5BKT4 473 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 ALG10BQ5I7T1 473 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 C10orf25Q5T742 122 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 TTLL5Q6EMB2 1281 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 FAAH2Q6GMR7 532 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 FAM57BQ71RH2 274 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 RTL10Q7L3V2 364 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 BHLHA9Q7RTU4 235 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 MAATS1Q7Z4T9 603 aa2.65□□□□□ -1.99
PTPRC-208ENST00000427110 PIP4P1Q86T03 277 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms